(Q30366646)

21 June 2017

title

Evaluating evolutionary constraint on the rapidly evolving gene matK using protein composition. (English)

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21 June 2017

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Michelle M Barthet

1

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21 June 2017

Khidir W Hilu

series ordinal

2

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21 June 2017

publication date

20 December 2007

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Journal of Molecular Evolution

21 June 2017

published in

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21 June 2017

volume

66

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21 June 2017

issue

2

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21 June 2017

page(s)

85-97

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A simple method for estimating the intensity of purifying selection in protein-coding genes.

21 June 2017

cites work

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00239-007-9060-6

The effect of relaxed functional constraints on the photosynthetic gene rbcL in photosynthetic and nonphotosynthetic parasitic plants

21 January 2018

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Crossref

https://api.crossref.org/works/10.1007%2FS00239-007-9060-6

Splicing defective mutants of the COXI gene of yeast mitochondrial DNA: initial definition of the maturase domain of the group II intron aI2

21 January 2018

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12 December 2020

The matK gene: sequence variation and application in plant systematics.

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12 December 2020

Rate variation in parasitic plants: correlated and uncorrelated patterns among plastid genes of different function

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12 December 2020

Comparative analysis of splicing of the complete set of chloroplast group II introns in three higher plant mutants

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12 December 2020

Prediction of protein secondary structure at better than 70% accuracy

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12 December 2020

Methods and algorithms for statistical analysis of protein sequences

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12 December 2020

Application of multiple sequence alignment profiles to improve protein secondary structure prediction

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12 December 2020

Phylogenetic relationships of Cornaceae and close relatives inferred from matK and rbcL sequences

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12 December 2020

Domain structure and three-dimensional model of a group II intron-encoded reverse transcriptase

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12 December 2020

Many Parallel Losses of infA from Chloroplast DNA during Angiosperm Evolution with Multiple Independent Transfers to the Nucleus

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12 December 2020

Prediction of transmembrane segments in proteins utilising multiple sequence alignments

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12 December 2020

Angiosperm phylogeny based on matK sequence information

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12 December 2020

The chloroplast tRNALys(UUU) gene from mustard (Sinapis alba) contains a class II intron potentially coding for a maturase-related polypeptide

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12 December 2020

Leave it to the leaves: a molecular phylogenetic study of Malaxideae (Epidendroideae, Orchidaceae).

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12 December 2020

JPred: a consensus secondary structure prediction server

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12 December 2020

Assembly of an active group II intron-maturase complex by protein dimerization

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12 December 2020

A group II intron-encoded maturase functions preferentially in cis and requires both the reverse transcriptase and X domains to promote RNA splicing

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12 December 2020

Relationships among seed plants inferred from highly conserved genes: sorting conflicting phylogenetic signals among ancient lineages

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12 December 2020

Nuclear mutations that block group II RNA splicing in maize chloroplasts reveal several intron classes with distinct requirements for splicing factors

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12 December 2020

Purifying selection detected in the plastid gene matK and flanking ribozyme regions within a group II intron of nonphotosynthetic plants

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12 December 2020

Amino acid composition and the evolutionary rates of protein-coding genes.

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12 December 2020

Evolutionary constraints and the neutral theory

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12 December 2020

Database of homology-derived protein structures and the structural meaning of sequence alignment

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12 December 2020

Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs

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12 December 2020

Dating dispersal and radiation in the gymnosperm Gnetum (Gnetales)--clock calibration when outgroup relationships are uncertain

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12 December 2020

Review: protein secondary structure prediction continues to rise.

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12 December 2020

Prediction of protein secondary structure and active sites using the alignment of homologous sequences

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12 December 2020

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

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12 December 2020

Patterns of evolutionary constraints in intronic and intergenic DNA of Drosophila.

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12 December 2020

Splicing and intron-internal RNA editing of trnK-matK transcripts in barley plastids: support for MatK as an essential splice factor

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12 December 2020

Expression of matK: functional and evolutionary implications

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12 December 2020

Comprehensive analysis of amino acid and nucleotide composition in eukaryotic genomes, comparing genes and pseudogenes

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12 December 2020

Evolutionary relationships among group II intron-encoded proteins and identification of a conserved domain that may be related to maturase function

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12 December 2020

Phylogenetic utility of rapidly evolving DNA at high taxonomical levels: contrasting matK, trnT-F, and rbcL in basal angiosperms

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12 December 2020

Extreme variations in the ratios of non-synonymous to synonymous nucleotide substitution rates in signal peptide evolution

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12 December 2020

The Pfam protein families database

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12 December 2020

Selective constraints, amino acid composition, and the rate of protein evolution

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12 December 2020

Double Fertilization in Gnetum gnemon: The Relationship between the Cell Cycle and Sexual Reproduction

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12 December 2020

The mat-r open reading frame is transcribed from a non-canonical promoter and contains an internal promoter to co-transcribe exons nad1e and nad5III in wheat mitochondria

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12 December 2020

RNA and protein catalysis in group II intron splicing and mobility reactions using purified components

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12 December 2020

Evolution of protein inhibitors of serine proteinases: Positive Darwinian selection or compositional effects?

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12 December 2020

What amino acid properties affect protein evolution?

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12 December 2020

Transcription, splicing and editing of plastid RNAs in the nonphotosynthetic plant Epifagus virginiana

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12 December 2020

The structure and function of RuBisCO and their implications for systematic studies

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12 December 2020

A bacterial group II intron encoding reverse transcriptase, maturase, and DNA endonuclease activities: biochemical demonstration of maturase activity and insertion of new genetic information within the intron

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12 December 2020

Seed plant phylogeny: Demise of the anthophyte hypothesis?

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12 December 2020

The PredictProtein server

1 reference

12 December 2020

10.1007/S00239-007-9060-6

Identifiers

DOI

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Dimensions Publication ID

21 June 2017

1009240080

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