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Domain Hierarchy and closed Loops (DHcL): a server for exploring hierarchy of protein domain structure.
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scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
title
Domain Hierarchy and closed Loops (DHcL): a server for exploring hierarchy of protein domain structure
(English)
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
author
Grzegorz Koczyk
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
author name string
Igor N Berezovsky
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
language of work or name
English
0 references
publication date
23 May 2008
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
published in
Nucleic Acids Research
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
volume
36
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
issue
Web Server issue
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
page(s)
W239-45
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
cites work
Partitioning protein structures into domains: why is it so difficult?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
retrieved
3 June 2018
Toward consistent assignment of structural domains in proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
retrieved
3 June 2018
PDB file parser and structure class implemented in Python
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
retrieved
3 June 2018
Closed loops of nearly standard size: common basic element of protein structure.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
retrieved
3 June 2018
Domain assignment for protein structures using a consensus approach: characterization and analysis
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
retrieved
3 June 2018
CATH--a hierarchic classification of protein domain structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
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3 June 2018
Do salt bridges stabilize proteins? A continuum electrostatic analysis.
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PubMed Central
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3 June 2018
SCOP: a structural classification of proteins database for the investigation of sequences and structures
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
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3 June 2018
The anatomy and taxonomy of protein structure
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
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3 June 2018
The hydrolysis of rabbit y-globulin and antibodies with crystalline papain
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
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26 November 2018
Discrete structure of van der Waals domains in globular proteins
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
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26 November 2018
PDP: protein domain parser.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
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26 November 2018
Hierarchy of the interaction energy distribution in the spatial structure of globular proteins and the problem of domain definition.
1 reference
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reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447749
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26 November 2018
A new approach for the calculation of the energy of van der Waals interactions in macromolecules of globular proteins
1 reference
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PubMed
reference URL
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12 December 2020
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Distribution of charges in Bacillus intermedius 7P ribonuclease determines the number of cooperatively melting regions of the globule
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18502776
retrieved
12 December 2020
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inferred from PubMed ID database lookup
Van der Waals locks: loop-n-lock structure of globular proteins
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18502776
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/GKN326
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
DBLP publication ID
journals/nar/KoczykB08
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
2447749
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
PubMed ID
18502776
1 reference
stated in
Europe PubMed Central
PMCID
2447749
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18502776%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
ResearchGate publication ID
5347070
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