(Q30417592)

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NMSim web server: integrated approach for normal mode-based geometric simulations of biologically relevant conformational transitions in proteins

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

NMSim web server: integrated approach for normal mode-based geometric simulations of biologically relevant conformational transitions in proteins (English)

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

1 reference

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author name string

Dennis M Krüger

1

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Aqeel Ahmed

2

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Holger Gohlke

3

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

language of work or name

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publication date

4 June 2012

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

40

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Web Server issue

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

W310-6

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

copyright license

Creative Commons Attribution-NonCommercial 3.0 Unported

5 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

The Amber biomolecular simulation programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394247

20 June 2018

Molecular dynamics simulation of nucleic acids: successes, limitations, and promise

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394247

20 June 2018

Conformational change of proteins arising from normal mode calculations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394247

20 June 2018

Asparagine and glutamine: using hydrogen atom contacts in the choice of side-chain amide orientation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394247

20 June 2018

Dynamics of folded proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394247

20 June 2018

Computational drug design accommodating receptor flexibility: the relaxed complex scheme

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS478

21 January 2018

Protein flexibility in ligand docking and virtual screening to protein kinases.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS478

21 January 2018

Geometry-based sampling of conformational transitions in proteins.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS478

21 January 2018

Constrained geometric simulation of diffusive motion in proteins

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS478

21 January 2018

Analysis of domain motions by approximate normal mode calculations.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS478

21 January 2018

Multiscale modeling of macromolecular conformational changes combining concepts from rigidity and elastic network theory.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS478

21 January 2018

Protein flexibility predictions using graph theory

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS478

21 January 2018

Effects of ligand binding on the association properties and conformation in solution of retinoic acid receptors RXR and RAR.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS478

21 January 2018

Conformational transitions in adenylate kinase. Allosteric communication reduces misligation

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS478

21 January 2018

A normal mode-based geometric simulation approach for exploring biologically relevant conformational transitions in proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394247

26 November 2018

Identifiers

10.1093/NAR/GKS478

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

DBLP publication ID

journals/nar/KrugerAG12

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

ResearchGate publication ID

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