(Q30417858)

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Comparison of and limits of accuracy for statistical analyses of vibrational and electronic circular dichroism spectra in terms of correlations to and predictions of protein secondary structure.

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

Comparison of and limits of accuracy for statistical analyses of vibrational and electronic circular dichroism spectra in terms of correlations to and predictions of protein secondary structure (English)

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

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protein structure prediction

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1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

author name string

E Bitto

2

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Europe PubMed Central

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23 October 2019

V Janota

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

M Urbanova

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

V P Gupta

5

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23 October 2019

T A Keiderling

6

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23 October 2019

publication date

1 July 1995

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

Protein Science

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

7

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PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

1384-1401

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

A self-consistent method for the analysis of protein secondary structure from circular dichroism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Frequency analysis of infrared absorption and vibrational circular dichroism of proteins in D2O solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Determination of the secondary structures of proteins by circular dichroism and optical rotatory dispersion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Circular dichroism and its empirical application to biopolymers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Analysis of protein circular dichroism spectra for secondary structure using a simple matrix multiplication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Secondary structure of proteins through circular dichroism spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Determination of the secondary structure content of proteins in aqueous solutions from their amide I and amide II infrared bands. Comparison between classical and partial least-squares methods.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Protein secondary structure and circular dichroism: a practical guide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Quantitative IR spectrophotometry of peptide compounds in water (H2O) solutions. III. Estimation of the protein secondary structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Statistical analyses of the vibrational circular dichroism of selected proteins and relationship to secondary structures.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Convex constraint analysis: a natural deconvolution of circular dichroism curves of proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Protein secondary structure from Fourier transform infrared spectroscopy: a data base analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Relationships between secondary structure fractions for globular proteins. Neural network analyses of crystallographic data sets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Vibrational CD of the amide II band in some model polypeptides and proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Automatic identification of secondary structure in globular proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

14 July 2018

Circular dichroic analysis of protein conformation: inclusion of the beta-turns.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

26 November 2018

Protein secondary structure from circular dichroism spectroscopy. Combining variable selection principle and cluster analysis with neural network, ridge regression and self-consistent methods.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

26 November 2018

Estimation of globular protein secondary structure from circular dichroism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

26 November 2018

Information content in the circular dichroism of proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143158

26 November 2018

Computed circular dichroism spectra for the evaluation of protein conformation

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A computer-assisted model for estimating protein secondary structure from circular dichroic spectra: comparison of animal lactate dehydrogenases

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vibrational circular dichroism of polypeptides. II. Solution amide II and deuteration results

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vibrational circular dichroism of polypeptides, V. A study of 3(10)-helical-octapeptides

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Examination of the secondary structure of proteins by deconvolved FTIR spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Calculation of protein conformation from circular dichroism

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein secondary structure analysis using Raman amide I and amide III spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Variable selection method improves the prediction of protein secondary structure from circular dichroism spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhanced sensitivity to conformation in various proteins. Vibrational circular dichroism results

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Estimation of protein secondary structure and error analysis from circular dichroism spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systematic comparison of statistical analyses of electronic and vibrational circular dichroism for secondary structure prediction of selected proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Peptides from chiral Cα,α-disubstituted glycines Synthesis and characterization, conformational energy computations and solution conformational analysis of Cα-methyl, Cα-isopropylglycine [(αMe)Val] derivatives and model peptides*

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A new approach to the calculation of secondary structures of globular proteins by optical rotatory dispersion and circular dichroism

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vibrational circular dichroism studies of epidermal growth factor and basic fibroblast growth factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Spectroscopic study of the temperature-dependent conformation of glucoamylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein secondary structure from Fourier transform infrared and/or circular dichroism spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformational study of sequential Lys and Leu based polymers and oligomers using vibrational and electronic CD spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of ?-bend ribbon spiral forming peptides using electronic and vibrational CD

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reassessment of the random coil conformation: vibrational CD study of proline oligopeptides and related polypeptides

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An infrared and circular dichroism combined approach to the analysis of protein secondary structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extending CD spectra of proteins to 168 nm improves the analysis for secondary structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/7670380

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/PRO.5560040713

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7670380%20AND%20SRC:MED&resulttype=core&format=json

23 October 2019

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