(Q30424569)

21 June 2017

title

Constructing amino acid residue substitution classes maximally indicative of local protein structure (English)

1 reference

21 June 2017

Thompson MJ

1

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21 June 2017

Goldstein RA

series ordinal

2

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21 June 2017

language of work or name

English

0 references

publication date

1 May 1996

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21 June 2017

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21 June 2017

volume

25

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21 June 2017

issue

1

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21 June 2017

page(s)

28-37

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Principles that determine the structure of proteins

21 June 2017

cites work

1 reference

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The cytochrome fold and the evolution of bacterial energy metabolism

21 January 2018

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Comparison of the structures of globins and phycocyanins: evidence for evolutionary relationship

21 January 2018

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Evolutionary Rate at the Molecular Level

21 January 2018

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21 January 2018

Non-Darwinian Evolution

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Improvements in the prediction of protein backbone topography by reduction of statistical errors

21 January 2018

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The predicted secondary structure of enolase

21 January 2018

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Prediction of secondary structure by evolutionary comparison: application to the alpha subunit of tryptophan synthase

21 January 2018

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Prediction of protein secondary structure and active sites using the alignment of homologous sequences

21 January 2018

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A study of the structure of human complement component factor H by Fourier transform infrared spectroscopy and secondary structure averaging methods.

21 January 2018

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21 January 2018

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Three-dimensional model for the hormone binding domains of steroid receptors

21 January 2018

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An algorithm to compare secondary structure predictions

21 January 2018

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Prediction of the occurrence of the ADP-binding beta alpha beta-fold in proteins, using an amino acid sequence fingerprint

21 January 2018

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Prediction of a common structural domain in aminoacyl-tRNA synthetases through use of a new pattern-directed inference system

21 January 2018

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PROSITE: a dictionary of sites and patterns in proteins

21 January 2018

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Evaluation of the sequence template method for protein structure prediction. Discrimination of the (beta/alpha)8-barrel fold.

21 January 2018

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Profile analysis: detection of distantly related proteins

21 January 2018

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Secondary structure-based profiles: use of structure-conserving scoring tables in searching protein sequence databases for structural similarities

21 January 2018

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A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

21 January 2018

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Use of amino acid environment-dependent substitution tables and conformational propensities in structure prediction from aligned sequences of homologous proteins. I. Solvent accessibility classes.

21 January 2018

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Prediction of protein secondary structure by combining nearest-neighbor algorithms and multiple sequence alignments

21 January 2018

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Combining evolutionary information and neural networks to predict protein secondary structure

21 January 2018

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Conservation and prediction of solvent accessibility in protein families

21 January 2018

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Patterns of divergence in homologous proteins as indicators of secondary and tertiary structure: a prediction of the structure of the catalytic domain of protein kinases

21 January 2018

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Jury returns on structure prediction

21 January 2018

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Bona fide prediction of aspects of protein conformation. Assigning interior and surface residues from patterns of variation and conservation in homologous protein sequences.

21 January 2018

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21 January 2018

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How frequent are correlated changes in families of protein sequences?

21 January 2018

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Can three-dimensional contacts in protein structures be predicted by analysis of correlated mutations?

21 January 2018

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Compensating changes in protein multiple sequence alignments

21 January 2018

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Automatic generation of primary sequence patterns from sets of related protein sequences

21 January 2018

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Pattern-induced multi-sequence alignment (PUMA) algorithm employing secondary structure-dependent gap penalties for use in comparative protein modelling

21 January 2018

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The classification of amino acid conservation.

21 January 2018

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Predicting solvent accessibility: higher accuracy using Bayesian statistics and optimized residue substitution classes.

21 January 2018

1 reference

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Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins

21 January 2018

1 reference

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Information content of binding sites on nucleotide sequences

21 January 2018

1 reference

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Identification of protein folds: matching hydrophobicity patterns of sequence sets with solvent accessibility patterns of known structures

21 January 2018

1 reference

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Features of spliceosome evolution and function inferred from an analysis of the information at human splice sites.

21 January 2018

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Determination of eukaryotic protein coding regions using neural networks and information theory

21 January 2018

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Information analysis of sequences that bind the replication initiator RepA.

21 January 2018

1 reference

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Information theory analysis of the relationship between primary sequence structure and ligand recognition among a class of facilitated transporters

21 January 2018

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Equation of State Calculations by Fast Computing Machines

21 January 2018

1 reference

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Enlarged representative set of protein structures

21 January 2018

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Database of homology-derived protein structures and the structural meaning of sequence alignment

21 January 2018

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Protein structure prediction: recognition of primary, secondary, and tertiary structural features from amino acid sequence.

21 January 2018

1 reference

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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

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The Protein Data Bank: a computer-based archival file for macromolecular structures

21 January 2018

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Environment and exposure to solvent of protein atoms. Lysozyme and insulin

21 January 2018

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Combinatorial cassette mutagenesis as a probe of the informational content of protein sequences

21 January 2018

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Protein design by binary patterning of polar and nonpolar amino acids

21 January 2018

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Flexible protein sequence patterns

21 January 2018

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Protein structure prediction

21 January 2018

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Recognition of super-secondary structure in proteins

21 January 2018

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Protein structure prediction

21 January 2018

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Further developments of protein secondary structure prediction using information theory. New parameters and consideration of residue pairs

21 January 2018

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10.1002/(SICI)1097-0134(199605)25:1<28::AID-PROT3>3.0.CO;2-G

21 January 2018

Identifiers

DOI

1 reference

21 June 2017

1 reference