(Q30429321)

14 September 2017

Enhanced peptide quantification using spectral count clustering and cluster abundance (English)

1 reference

14 September 2017

Seungmook Lee

1

1 reference

14 September 2017

Min-Seok Kwon

2

1 reference

14 September 2017

Hyoung-Joo Lee

3

1 reference

14 September 2017

Young-Ki Paik

4

1 reference

14 September 2017

Haixu Tang

5

1 reference

14 September 2017

Jae K Lee

6

1 reference

14 September 2017

Taesung Park

7

1 reference

14 September 2017

28 October 2011

1 reference

14 September 2017

1 reference

14 September 2017

12

1 reference

14 September 2017

423

1 reference

Creative Commons Attribution 2.0 Generic

14 September 2017

start time

28 October 2011

1 reference

April 2022 Public Data File from Crossref

Creative Commons Attribution 2.0 Generic

0 references

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-12-423

0 references

cites work

DeltAMT: a statistical algorithm for fast detection of protein modifications from LC-MS/MS data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Open MS/MS spectral library search to identify unanticipated post-translational modifications and increase spectral identification rate

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Analysis of differentially expressed mitochondrial proteins in chromophobe renal cell carcinomas and renal oncocytomas by 2-D gel electrophoresis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Overexpression of galectin-7, a myoepithelial cell marker, enhances spontaneous metastasis of breast cancer cells.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Gene expression patterns distinguish breast carcinomas from normal breast tissues: the Malaysian context

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

ReSASC: a resampling-based algorithm to determine differential protein expression from spectral count data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

On the beta-binomial model for analysis of spectral count data in label-free tandem mass spectrometry-based proteomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Human plasma carboxylesterase 1, a novel serologic biomarker candidate for hepatocellular carcinoma

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Identification of differentially expressed proteins in triple-negative breast carcinomas using DIGE and mass spectrometry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Suitable reference genes for real-time PCR in human HBV-related hepatocellular carcinoma with different clinical prognoses

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Label-free mass spectrometry-based protein quantification technologies in proteomic analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Overview of tandem mass spectrometry (MS/MS) database search algorithms

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Analysis and validation of proteomic data generated by tandem mass spectrometry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Identification of biomarkers associated with the development of hepatocellular carcinoma in CuZn superoxide dismutase deficient mice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Development and validation of a spectral library searching method for peptide identification from MS/MS.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

PEPPeR, a platform for experimental proteomic pattern recognition.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Overexpression and elevated serum levels of phosphoglycerate kinase 1 in pancreatic ductal adenocarcinoma

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Mass spectrometry-based proteomics turns quantitative

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Dynamic spectrum quality assessment and iterative computational analysis of shotgun proteomic data: toward more efficient identification of post-translational modifications, sequence polymorphisms, and novel peptides

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Automated protein identification by tandem mass spectrometry: issues and strategies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

A software suite for the generation and comparison of peptide arrays from sets of data collected by liquid chromatography-mass spectrometry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

An evaluation, comparison, and accurate benchmarking of several publicly available MS/MS search algorithms: sensitivity and specificity analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

High throughput quantitative analysis of serum proteins using glycopeptide capture and liquid chromatography mass spectrometry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Improving large-scale proteomics by clustering of mass spectrometry data.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Reproducibility of quantitative proteomic analyses of complex biological mixtures by multidimensional protein identification technology

20 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

Comparison of label-free methods for quantifying human proteins by shotgun proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

StatQuant: a post-quantification analysis toolbox for improving quantitative mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

Informatics platform for global proteomic profiling and biomarker discovery using liquid chromatography-tandem mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

Underexpression of mRNA in human hepatocellular carcinoma focusing on eight loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

Candidate genes responsible for human hepatocellular carcinoma identified from differentially expressed genes in hepatocarcinogenesis of the tree shrew (Tupaia belangeri chinesis).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

Characterization of the immune escape phenotype of human gastric cancers with and without high-frequency microsatellite instability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

A new versatile peptide-based size exclusion chromatography platform for global profiling and quantitation of candidate biomarkers in hepatocellular carcinoma specimens

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

Mass spectral compatibility of four proteomics stains

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-12-423

ProteinQuant Suite: a bundle of automated software tools for label-free quantitative proteomics.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Signal maps for mass spectrometry-based comparative proteomics.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234305

Semi-supervised LC/MS alignment for differential proteomics

26 November 2018

1 reference

12 December 2020

Application of champedak mannose-binding lectin in the glycoproteomic profiling of serum samples unmasks reduced expression of alpha-2 macroglobulin and complement factor B in patients with nasopharyngeal carcinoma

1 reference

12 December 2020

[Screening and identification of ovarian carcinomas related genes]

1 reference

12 December 2020

Application of a peptide-based PF2D platform for quantitative proteomics in disease biomarker discovery

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2105-12-423

1 reference

journals/bmcbi/LeeKLPTLP11

14 September 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

14 September 2017

1 reference