(Q30482677)

16 August 2017

Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin (English)

1 reference

16 August 2017

Jory Z Ruscio

1

1 reference

16 August 2017

Deept Kumar

2

1 reference

16 August 2017

Maulik Shukla

3

1 reference

16 August 2017

Michael G Prisant

4

1 reference

16 August 2017

T M Murali

5

1 reference

16 August 2017

Alexey V Onufriev

6

1 reference

16 August 2017

language of work or name

English

0 references

publication date

1 July 2008

1 reference

16 August 2017

6

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

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16 August 2017

105

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16 August 2017

27

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16 August 2017

9204-9209

1 reference

Imaging the migration pathways for O2, CO, NO, and Xe inside myoglobin

16 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Human myoglobin recognition of oxygen: dynamics of the energy landscape

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Unveiling functional protein motions with picosecond x-ray crystallography and molecular dynamics simulations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Extended molecular dynamics simulation of the carbon monoxide migration in sperm whale myoglobin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Myoglobin cavities provide interior ligand pathway.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Competition with xenon elicits ligand migration and escape pathways in myoglobin.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Myoglobin: the hydrogen atom of biology and a paradigm of complexity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Cavities and packing defects in the structural dynamics of myoglobin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Diffractive optics-based heterodyne-detected four-wave mixing signals of protein motion: from "protein quakes" to ligand escape for myoglobin.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Ligand binding and conformational motions in myoglobin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Structure of a ligand-binding intermediate in wild-type carbonmonoxy myoglobin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Crystal structures of myoglobin-ligand complexes at near-atomic resolution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Photolysis of the carbon monoxide complex of myoglobin: nanosecond time-resolved crystallography.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Kinetic pathways and barriers for ligand binding to myoglobin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Crystal structure of photolysed carbonmonoxy-myoglobin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Structural and functional effects of apolar mutations of the distal valine in myoglobin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Discovery of new ligand binding pathways in myoglobin by random mutagenesis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Reaction of myoglobin with phenylhydrazine: a molecular doorstop.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Cavities in proteins: structure of a metmyoglobin-xenon complex solved to 1.9 A.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Structure of alkaline metmyoglobin-xenon complex.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Dynamics of carbon monoxide binding by heme proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Internal cavities and buried waters in globular proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

The role of the distal histidine in myoglobin and haemoglobin.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Discrimination between oxygen and carbon monoxide and inhibition of autooxidation by myoglobin. Site-directed mutagenesis of the distal histidine

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Ligand binding to a hemoprotein lacking the distal histidine. The myoglobin from aplysia limacina (Val(E7)).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Neutron diffraction study of carbonmonoxymyoglobin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453746

Watching a protein as it functions with 150-ps time-resolved x-ray crystallography

20 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710825105

Molecular dynamics simulation of sperm whale myoglobin: effects of mutations and trapped CO on the structure and dynamics of cavities

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710825105

Mapping the pathways for O2 entry into and exit from myoglobin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710825105

The escape process of carbon monoxide from myoglobin to solution at physiological temperature

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710825105

Geminate recombination of carbon monoxide to myoglobin

21 January 2018

1 reference

12 December 2020

Structure of myoglobin-ethyl isocyanide histidine as a swinging door for ligand entry

1 reference

12 December 2020

The role of Val68(E11) in ligand binding to sperm whale myoglobin. Site-directed mutagenesis of a synthetic gene

1 reference

12 December 2020

Binding of CO to myoglobin from a heme pocket docking site to form nearly linear Fe-C-O

1 reference

12 December 2020

An x-ray study of azide methaemoglobin

1 reference

12 December 2020

Dynamics of ligand binding to heme proteins

1 reference

12 December 2020

Ultrafast rotation and trapping of carbon monoxide dissociated from myoglobin

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0710825105

1 reference

16 August 2017

0 references

1 reference

16 August 2017

PubMed publication ID

18599444

1 reference