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Antagonistic factors control the unproductive splicing of SC35 terminal intron.
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2831310
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13 February 2020
title
Antagonistic factors control the unproductive splicing of SC35 terminal intron
(English)
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2831310
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13 February 2020
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Natacha Dreumont
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1
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13 February 2020
Isabelle Behm-Ansmant
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2831310
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13 February 2020
Cyril F Bourgeois
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13 February 2020
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Sara Hardy
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2
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13 February 2020
Liliane Kister
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4
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13 February 2020
Christiane Branlant
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5
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13 February 2020
James Stévenin
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6
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13 February 2020
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3 December 2009
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13 February 2020
published in
Nucleic Acids Research
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13 February 2020
volume
38
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13 February 2020
issue
4
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2831310
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13 February 2020
page(s)
1353-1366
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2831310
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13 February 2020
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11 June 2022
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Binding of DAZAP1 and hnRNPA1/A2 to an exonic splicing silencer in a natural BRCA1 exon 18 mutant
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Caffeine regulates alternative splicing in a subset of cancer-associated genes: a role for SC35.
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Splicing regulator SC35 is essential for genomic stability and cell proliferation during mammalian organogenesis
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Nonsense-mediated mRNA decay affects nonsense transcript levels and governs response of cystic fibrosis patients to gentamicin
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Biochemical and NMR study on the competition between proteins SC35, SRp40, and heterogeneous nuclear ribonucleoprotein A1 at the HIV-1 Tat exon 2 splicing site
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Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements
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20 June 2018
Up-regulation of the ubiquitous alternative splicing factor Tra2beta causes inclusion of a germ cell-specific exon
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Influence of RNA secondary structure on the pre-mRNA splicing process
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Human tra2-beta1 autoregulates its protein concentration by influencing alternative splicing of its pre-mRNA.
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Exon Identity Established through Differential Antagonism between Exonic Splicing Silencer-Bound hnRNP A1 and Enhancer-Bound SR Proteins
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TIA-1 and TIAR activate splicing of alternative exons with weak 5' splice sites followed by a U-rich stretch on their own pre-mRNAs
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20 June 2018
SC35 autoregulates its expression by promoting splicing events that destabilize its mRNAs
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20 June 2018
SC35 plays a role in T cell development and alternative splicing of CD45.
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20 June 2018
Conserved stem-loop structures in the HIV-1 RNA region containing the A3 3' splice site and its cis-regulatory element: possible involvement in RNA splicing
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20 June 2018
Alternative splicing of intron 3 of the serine/arginine-rich protein 9G8 gene. Identification of flanking exonic splicing enhancers and involvement of 9G8 as a trans-acting factor
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
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20 June 2018
Exonic splicing enhancer motif recognized by human SC35 under splicing conditions
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
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20 June 2018
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
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20 June 2018
The splicing factors 9G8 and SRp20 transactivate splicing through different and specific enhancers.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
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20 June 2018
Multiple distinct splicing enhancers in the protein-coding sequences of a constitutively spliced pre-mRNA.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
retrieved
20 June 2018
The splicing factor SRp20 modifies splicing of its own mRNA and ASF/SF2 antagonizes this regulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
retrieved
20 June 2018
The SR splicing factors ASF/SF2 and SC35 have antagonistic effects on intronic enhancer-dependent splicing of the beta-tropomyosin alternative exon 6A
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
retrieved
20 June 2018
Assembly of specific SR protein complexes on distinct regulatory elements of the Drosophila doublesex splicing enhancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
retrieved
20 June 2018
The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
retrieved
20 June 2018
Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
retrieved
26 November 2018
An exon skipping-associated nonsense mutation in the dystrophin gene uncovers a complex interplay between multiple antagonistic splicing elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
retrieved
26 November 2018
Inhibition of nonsense-mediated mRNA decay rescues the phenotype in Ullrich's disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2831310
retrieved
26 November 2018
Identifiers
DOI
10.1093/NAR/GKP1086
1 reference
stated in
Europe PubMed Central
PMC publication ID
2831310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965769%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 February 2020
PMC publication ID
2831310
1 reference
stated in
Europe PubMed Central
PMC publication ID
2831310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965769%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 February 2020
PubMed publication ID
19965769
1 reference
stated in
Europe PubMed Central
PMC publication ID
2831310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965769%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 February 2020
ResearchGate publication ID
40452738
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