(Q30540366)

14 October 2017

Modeling and simulation of biological systems from image data (English)

1 reference

14 October 2017

1

1 reference

14 October 2017

Ivo F Sbalzarini

1

1 reference

PubMed ID

23533152

24 June 2017

language of work or name

English

0 references

publication date

27 March 2013

1 reference

14 October 2017

1 reference

14 October 2017

35

1 reference

14 October 2017

5

1 reference

14 October 2017

482-490

1 reference

A whole-cell computational model predicts phenotype from genotype

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Cell-free transmission of human adenovirus by passive mass transfer in cell culture simulated in a computer model

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Biological imaging software tools

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Intrinsic noise alters the frequency spectrum of mesoscopic oscillatory chemical reaction systems.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Discrete region competition for unknown numbers of connected regions.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

20 June 2018

Whither systems biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Noise-induced modulation of the relaxation kinetics around a non-equilibrium steady state of non-linear chemical reaction networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Tensile forces and shape entropy explain observed crista structure in mitochondria

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Counter-intuitive stochastic behavior of simple gene circuits with negative feedback

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

FAST MONTE CARLO SIMULATION METHODS FOR BIOLOGICAL REACTION-DIFFUSION SYSTEMS IN SOLUTION AND ON SURFACES.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

A Lagrangian particle method for reaction-diffusion systems on deforming surfaces.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Shape reconstruction of subcellular structures from live cell fluorescence microscopy images.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Virtual Cell modelling and simulation software environment.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Diffusion on a Curved Surface Coupled to Diffusion in the Volume: Application to Cell Biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Modelling and simulation techniques for membrane biology.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Rough sheets and smooth tubules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Simulations of (an)isotropic diffusion on curved biological surfaces.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Feature point tracking and trajectory analysis for video imaging in cell biology.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Effects of organelle shape on fluorescence recovery after photobleaching

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Computational systems biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Computational cell biology: spatiotemporal simulation of cellular events

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Systems biology: a brief overview

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Systems biology: the reincarnation of systems theory applied in biology?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Anomalous subdiffusion in fluorescence photobleaching recovery: a Monte Carlo study

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Studying protein dynamics in living cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Whole-cell simulation: a grand challenge of the 21st century

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Confined lateral diffusion of membrane receptors as studied by single particle tracking (nanovid microscopy). Effects of calcium-induced differentiation in cultured epithelial cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

A theory of biological pattern formation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Mobility measurement by analysis of fluorescence photobleaching recovery kinetics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3674526

Systems survey of endocytosis by multiparametric image analysis.

20 June 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200051

An Introduction to Kolmogorov Complexity and Its Applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200051

Cell-cell communication by quorum sensing and dimension-reduction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200051

Noise-induced breakdown of the Michaelis-Menten equation in steady-state conditions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200051

Discreteness-induced concentration inversion in mesoscopic chemical systems.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200051

Spatial and stochastic cellular modeling with the Smoldyn simulator.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200051

A Simplex Method for Function Minimization

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200051

Computer vision in cell biology

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23533152

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Geometry-controlled kinetics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23533152

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Turing's next steps: the mechanochemical basis of morphogenesis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23533152

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/BIES.201200051

1 reference

14 October 2017

1 reference

14 October 2017

1 reference

PMCID

3674526