(Q30577953)

English

A high quality nuclear magnetic resonance solution structure of peptide deformylase from Escherichia coli: application of an automated assignment strategy using GARANT.

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scholarly article

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Europe PubMed Central

PubMed publication ID

25 June 2017

A high quality nuclear magnetic resonance solution structure of peptide deformylase from Escherichia coli: application of an automated assignment strategy using GARANT. (English)

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

solution structure

1 reference

based on heuristic

inferred from title

Escherichia coli

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based on heuristic

inferred from title

author name string

O'Connell JF

1

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Pryor KD

2

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Grant SK

3

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Leiting B

4

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

publication date

1 April 1999

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Europe PubMed Central

PubMed publication ID

25 June 2017

Journal of Biomolecular NMR

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Europe PubMed Central

PubMed publication ID

25 June 2017

13

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Europe PubMed Central

PubMed publication ID

25 June 2017

4

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Europe PubMed Central

PubMed publication ID

25 June 2017

311-324

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Europe PubMed Central

PubMed publication ID

25 June 2017

THE NH2-TERMINAL RESIDUES OF THE PROTEINS FROM CELL-FREE EXTRACTS OF E. COLI

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1H, 13C and 15N chemical shift referencing in biomolecular NMR

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A new subclass of the zinc metalloproteases superfamily revealed by the solution structure of peptide deformylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Torsion angle dynamics for NMR structure calculation with the new program DYANA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The program XEASY for computer-supported NMR spectral analysis of biological macromolecules

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of the Escherichia coli peptide deformylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

N-FORMYL-METHIONYL-S-RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequential resonance assignments in protein 1H nuclear magnetic resonance spectra. Basic pancreatic trypsin inhibitor

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic characterization of polypeptide deformylase, a distinctive enzyme of eubacterial translation

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Local deformation studies of chain molecules: differential conditions for changes of dihedral angles

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The C-terminal domain of peptide deformylase is disordered and dispensable for activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The solution structure of eglin c based on measurements of many NOEs and coupling constants and its comparison with X‐ray structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficient computation of three-dimensional protein structures in solution from nuclear magnetic resonance data using the program DIANA and the supporting programs CALIBA, HABAS and GLOMSA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MOLMOL: a program for display and analysis of macromolecular structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solution structure of nickel-peptide deformylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure determination of the Antp(C39 → S) homeodomain from nuclear magnetic resonance data in solution using a novel strategy for the structure calculation with the programs DIANA, CALIBA, HABAS and GLOMSA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of peptide deformylase and identification of the substrate binding site

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR View: A computer program for the visualization and analysis of NMR data

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zinc coordination, function, and structure of zinc enzymes and other proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proton, nitrogen-15, carbon-13, carbon-13 monoxide assignments of human interleukin-4 using three-dimensional double- and triple-resonance heteronuclear magnetic resonance spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Surface area included in energy refinement of proteins. A comparative study on atomic solvation parameters

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-level expression of soluble protein in Escherichia coli using a His6-tag and maltose-binding-protein double-affinity fusion system.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

All-atom empirical potential for molecular modeling and dynamics studies of proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene duplications in the structural evolution of chymotrypsin

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Automated sequence-specific NMR assignment of homologous proteins using the program GARANT.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystallographic refinement by simulated annealing. Application to a 2.8 A resolution structure of aspartate aminotransferase.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Methionine as translation start signal: a review of the enzymes of the pathway in Escherichia coli.

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of the high-resolution structures of the alpha-amylase inhibitor tendamistat determined by nuclear magnetic resonance in solution and by X-ray diffraction in single crystals

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel strategies for sensitivity enhancement in heteronuclear multi-dimensional NMR experiments employing pulsed field gradients

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enzymatic properties of Escherichia coli peptide deformylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/10353194

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1023/A:1008311502626

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Dimensions Publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

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