(Q30729891)

26 June 2017

title

Improved repetitive-element PCR fingerprinting for resolving pathogenic and nonpathogenic phylogenetic groups within Escherichia coli (English)

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26 June 2017

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J R Johnson

1

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26 June 2017

T T O'Bryan

series ordinal

2

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26 June 2017

language of work or name

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1 March 2000

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Clinical and Vaccine Immunology

26 June 2017

published in

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26 June 2017

volume

7

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26 June 2017

issue

2

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26 June 2017

page(s)

265-273

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Improved repetitive-element PCR fingerprinting of Salmonella enterica with the use of extremely elevated annealing temperatures

26 June 2017

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The link between phylogeny and virulence in Escherichia coli extraintestinal infection

14 July 2018

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Escherichia coli molecular phylogeny using the incongruence length difference test

14 July 2018

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Genomic analysis of a pathogenicity island in uropathogenic Escherichia coli CFT073: distribution of homologous sequences among isolates from patients with pyelonephritis, cystitis, and Catheter-associated bacteriuria and from fecal samples

14 July 2018

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Chromosomal regions specific to pathogenic isolates of Escherichia coli have a phylogenetically clustered distribution.

14 July 2018

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The genetic structure of Escherichia coli populations in feral house mice

14 July 2018

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Pathogenicity island sequences of pyelonephritogenic Escherichia coli CFT073 are associated with virulent uropathogenic strains.

14 July 2018

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Characteristics and prevalence within serogroup O4 of a J96-like clonal group of uropathogenic Escherichia coli O4:H5 containing the class I and class III alleles of papG.

14 July 2018

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Discovery of disseminated J96-like strains of uropathogenic Escherichia coli O4:H5 containing genes for both PapG(J96) (class I) and PrsG(J96) (class III) Gal(alpha1-4)Gal-binding adhesins

14 July 2018

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Pathogenicity islands: bacterial evolution in quantum leaps

14 July 2018

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Molecular evidence supporting the existence of two major groups in uropathogenic Escherichia coli.

14 July 2018

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A PCR-based DNA fingerprinting technique: AFLP for molecular typing of bacteria

14 July 2018

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Pathogenicity island evaluation in Escherichia coli K1 by crossing with laboratory strain K-12

14 July 2018

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Two pathogenicity islands in uropathogenic Escherichia coli J96: cosmid cloning and sample sequencing.

14 July 2018

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Molecular identification of bacteria by fluorescence-based PCR-single-strand conformation polymorphism analysis of the 16S rRNA gene

14 July 2018

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RAPD (arbitrary primer) PCR is more sensitive than multilocus enzyme electrophoresis for distinguishing related bacterial strains

14 July 2018

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Amplifying DNA with arbitrary oligonucleotide primers.

14 July 2018

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Clonal relationships among bloodstream isolates of Escherichia coli

14 July 2018

1 reference

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Excision of large DNA regions termed pathogenicity islands from tRNA-specific loci in the chromosome of an Escherichia coli wild-type pathogen.

14 July 2018

1 reference

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Standard reference strains of Escherichia coli from natural populations

14 July 2018

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P-fimbriated clones among uropathogenic Escherichia coli strains

14 July 2018

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

14 July 2018

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Molecular epidemiology of bacterial infections: examples of methodology and of investigations of outbreaks

14 July 2018

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Genetic relationships and clonal structure of strains of Escherichia coli causing neonatal septicemia and meningitis

14 July 2018

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Escherichia coli infections.

14 July 2018

1 reference

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The spectrum of infections and pathogenic mechanisms of Escherichia coli

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Distribution of the P-associated-pilus (pap) region among Escherichia coli from natural sources: evidence for horizontal gene transfer

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Ribosomal ribonucleic acid gene restriction patterns as potential taxonomic tools.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Escherichia coli in extra-intestinal infections

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Genetic diversity in relation to serotype in Escherichia coli

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Fingerprinting genomes using PCR with arbitrary primers

14 July 2018

1 reference

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New molecular techniques for microbial epidemiology and the diagnosis of infectious diseases

14 July 2018

1 reference

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Urinary tract infection: economic considerations.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

DNA polymorphisms amplified by arbitrary primers are useful as genetic markers

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Molecular evolution of the Escherichia coli chromosome. III. Clonal frames

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Restriction fragment length polymorphisms among uropathogenic Escherichia coli isolates: pap-related sequences compared with rrn operons

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

'Touchdown' PCR to circumvent spurious priming during gene amplification

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Association of carboxylesterase B electrophoretic pattern with presence and expression of urovirulence factor determinants and antimicrobial resistance among strains of Escherichia coli that cause urosepsis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Virulence factors in Escherichia coli urinary tract infection

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Short, interspersed repetitive DNA sequences in prokaryotic genomes.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Horizontal gene transfer of the Escherichia coli pap and prs pili operons as a mechanism for the development of tissue-specific adhesive properties

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Clonal distribution of the three alleles of the Gal(alpha1-4)Gal-specific adhesin gene papG among Escherichia coli strains from patients with bacteremia

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Differentiation of Escherichia coli strains using randomly amplified polymorphic DNA analysis.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=95859

Colonization with and acquisition of uropathogenic Escherichia coli as revealed by polymerase chain reaction-based detection

25 November 2018

1 reference

12 December 2020

Genetic Diversity and Relationships among Strains of <i>Escherichia coli</i> in the Intestine and Those Causing Urinary Tract Infections

1 reference

12 December 2020

Recurring urinary tract infection: incidence and risk factors

1 reference

12 December 2020

Electrophoretic type B2 of carboxylesterase B for characterisation of highly pathogenic Escherichia coli strains from extra-intestinal infections

1 reference

12 December 2020

Sex in Escherichia coli does not disrupt the clonal structure of the population: evidence from random amplified polymorphic DNA and restriction-fragment-length polymorphism

1 reference

12 December 2020

Method to improve reliability of random-amplified polymorphic DNA markers

1 reference

12 December 2020

10.1128/CDLI.7.2.265-273.2000

Identifiers

DOI

1 reference

26 June 2017

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26 June 2017

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