(Q30756388)

13 October 2017

Assessment of insert sizes and adapter content in fastq data from NexteraXT libraries (English)

1 reference

13 October 2017

Frances S Turner

1

1 reference

13 October 2017

30 January 2014

1 reference

13 October 2017

Frontiers in Genetics

1 reference

13 October 2017

5

1 reference

13 October 2017

5

1 reference

NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries.

13 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

PEAR: a fast and accurate Illumina Paired-End reAd mergeR.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

AdapterRemoval: easy cleaning of next-generation sequencing reads

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

PANDAseq: paired-end assembler for illumina sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

FLASH: fast length adjustment of short reads to improve genome assemblies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

Search and clustering orders of magnitude faster than BLAST

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

Fast and accurate short read alignment with Burrows-Wheeler transform

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

AlienTrimmer: a tool to quickly and accurately trim off multiple short contaminant sequences from high-throughput sequencing reads

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

Btrim: a fast, lightweight adapter and quality trimming program for next-generation sequencing technologies.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906532

25 November 2018

Identifiers

DOI

10.3389/FGENE.2014.00005

1 reference

13 October 2017

1 reference

PMC publication ID

3906532

13 October 2017

PubMed publication ID

24523726

1 reference

PMC publication ID

3906532