(Q30834236)

21 August 2017

RNA polymerase can track a DNA groove during promoter search (English)

1 reference

21 August 2017

Kumiko Sakata-Sogawa

1

1 reference

PMCID

522051

21 August 2017

Nobuo Shimamoto

series ordinal

2

1 reference

PMCID

522051

21 August 2017

language of work or name

English

0 references

publication date

6 October 2004

1 reference

Proceedings of the National Academy of Sciences of the United States of America

21 August 2017

1 reference

21 August 2017

101

1 reference

21 August 2017

14731-14735

1 reference

21 August 2017

41

1 reference

Energetic and structural considerations for the mechanism of protein sliding along DNA in the nonspecific BamHI-DNA complex.

21 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Protein motion from non-specific to specific DNA by three-dimensional routes aided by supercoiling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

How to get from A to B: strategies for analysing protein motion on DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Structure of the bacterial RNA polymerase promoter specificity sigma subunit

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Detailed architecture of a DNA translocating machine: the high-resolution structure of the bacteriophage phi29 connector particle

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Twisting and stretching single DNA molecules.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Direct observation of one-dimensional diffusion and transcription by Escherichia coli RNA polymerase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

RNA polymerase-promoter interactions: the comings and goings of RNA polymerase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Comparison of the DNA association kinetics of the Lac repressor tetramer, its dimeric mutant LacIadi, and the native dimeric Gal repressor

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Use of surface plasmon resonance to probe the equilibrium and dynamic aspects of interactions between biological macromolecules.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Visualization of single molecules of RNA polymerase sliding along DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Pausing of the restriction endonuclease EcoRI during linear diffusion on DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Kinetics of promoter search by Escherichia coli RNA polymerase. Effects of monovalent and divalent cations and temperature.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Facilitated target location in biological systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=522051

Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory.

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0406441101

A branched pathway in the early stage of transcription by Escherichia coli RNA polymerase.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0406441101

Obstacle bypass in protein motion along DNA by two-dimensional rather than one-dimensional sliding.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0406441101

Promoter recognition and discrimination by EsigmaS RNA polymerase

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15469913

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Accurate scanning of the BssHII endonuclease in search for its DNA cleavage site

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15469913

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

One-dimensional diffusion of proteins along DNA. Its biological and chemical significance revealed by single-molecule measurements

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15469913

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0406441101

1 reference

21 August 2017

0 references

1 reference

21 August 2017

1 reference

PMCID

522051