(Q30838298)

13 October 2017

5 references

19 June 2019

30 June 2019

14 September 2019

19 September 2019

13 September 2020

Reference-free SNP detection: dealing with the data deluge (English)

1 reference

biomedical investigative technique

13 October 2017

1 reference

14 September 2019

1 reference

19 September 2019

1 reference

13 September 2020

1

1 reference

13 October 2017

Dan MacLean

2

1 reference

13 October 2017

language of work or name

English

0 references

publication date

20 May 2014

6 references

13 October 2017

19 June 2019

30 June 2019

14 September 2019

19 September 2019

13 September 2020

6 references

13 October 2017

19 June 2019

30 June 2019

14 September 2019

19 September 2019

13 September 2020

15 Suppl 4

1 reference

13 October 2017

S10

1 reference

Creative Commons Attribution 2.0 Generic

13 October 2017

5 references

19 June 2019

30 June 2019

14 September 2019

19 September 2019

Data compression for sequencing data

13 September 2020

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Development of genomic resources for the tick Ixodes ricinus: isolation and characterization of single nucleotide polymorphisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Exploring variation-aware contig graphs for (comparative) metagenomics using MaryGold

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Somatic mutation, genomic variation, and neurological disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Identifying and classifying trait linked polymorphisms in non-reference species by walking coloured de bruijn graphs.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Reference-free SNP calling: improved accuracy by preventing incorrect calls from repetitive genomic regions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Stacks: building and genotyping Loci de novo from short-read sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

De novo assembly and genotyping of variants using colored de Bruijn graphs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Genome-wide mapping and assembly of structural variant breakpoints in the mouse genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

De novo assembly of human genomes with massively parallel short read sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Computational methods for discovering structural variation with next-generation sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

ABySS: a parallel assembler for short read sequence data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Rapid SNP discovery and genetic mapping using sequenced RAD markers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

ALLPATHS: de novo assembly of whole-genome shotgun microreads

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

An Eulerian path approach to DNA fragment assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

PRISM: pair-read informed split-read mapping for base-pair level detection of insertion, deletion and structural variants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083407

10.1186/1471-2164-15-S4-S10

25 November 2018

Identifiers

DOI

1 reference

Dimensions Publication ID

13 October 2017

0 references

1 reference

13 October 2017

PubMed publication ID

25056481

1 reference