(Q30978995)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

title

Dinucleosome DNA of human K562 cells: experimental and computational characterizations (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

main subject

computational biology

1 reference

2

1 reference

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7 November 2019

author name string

Megumi Kato

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Yuko Wada-Kiyama

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Takashi Abe

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Toshimichi Ikemura

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Simon Kogan

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Alex Bolshoy

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Edward N Trifonov

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

Ryoiti Kiyama

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

language of work or name

English

0 references

publication date

1 September 2003

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

Journal of Molecular Biology

7 November 2019

number of pages

15

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

volume

332

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

page(s)

111-125

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

What positions nucleosomes?--A model

7 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Toward a unified model of chromatin folding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Nucleosome DNA sequence pattern revealed by multiple alignment of experimentally mapped sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

DNA curvature of the tobacco GRS repetitive sequence family and its relation to nucleosome positioning

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Localization of curved DNA and its association with nucleosome phasing in the promoter region of the human estrogen receptor α gene

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Transition between two forms of heterochromatin at plant subtelomeres

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Evolutionary conservation and functional synergism of curved DNA at the mouse epsilon- and other globin-gene promoters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Conservation and periodicity of DNA bend sites in the human beta-globin gene locus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Conservation and periodicity of DNA bend sites in eukaryotic genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

DNA bend sites in the human beta-globin locus: evidence for a basic and universal structural component of genomic DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Organization of spacer DNA in chromatin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Chromatin superstructure: The next level of structure above the nucleosome has an alternating character. A two-nucleosome based series is generated by probes armed with DNAase-I acting on isolated nuclei

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Nucleodisome - a new repeat unit of chromatin revealed in nuclei of pigeon erythrocytes by DNase I digestion

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Self-assembly of single and closely spaced nucleosome core particles

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Nucleotide sequence-directed mapping of the nucleosomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Sequence-specific positioning of core histones on an 860 base-pair DNA. Experiment and theory.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Periodicity of exonuclease III digestion of chromatin and the pitch of DNA on the nucleosome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Conservation of DNA bend sites with identical superhelical twists among the human, mouse, bovine, rabbit and chicken beta-globin genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

The locus of sequence-directed and protein-induced DNA bending

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Structure of the nucleosome core particle at 7 Å resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Chromatin reconstitution on small DNA rings. II. DNA supercoiling on the nucleosome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Nucleosome dynamics. III. Histone tail-dependent fluctuation of nucleosomes between open and closed DNA conformations. Implications for chromatin dynamics and the linking number paradox. A relaxation study of mononucleosomes on DNA minicircles.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Topography of the histone octamer surface: repeating structural motifs utilized in the docking of nucleosomal DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Periodicity of deoxyribonuclease I digestion of chromatin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

DNase II digestion of the nucleosome core: precise locations and relative exposures of sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Location of the primary sites of micrococcal nuclease cleavage on the nucleosome core

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Sequence periodicities in chicken nucleosome core DNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Radiolytic footprinting. Beta rays, gamma photons, and fast neutrons probe DNA-protein interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Artificial nucleosome positioning sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

The pitch of chromatin DNA is reflected in its nucleotide sequence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Sequence-dependent deformational anisotropy of chromatin DNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Crystal structure of the nucleosome core particle at 2.8 A resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Enhancer activity of HS2 of the human beta-LCR is modulated by distance from the key nucleosome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Nucleosome positioning at the replication fork

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

ApA dinucleotide periodicity in prokaryote, eukaryote, and organelle genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

A differential cloning procedure for rearranged or altered genomic DNA based on in-gel competitive reassociation.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Expression-dependent perturbation of nucleosomal phases at HS2 of the human beta-LCR: possible correlation with periodic bent DNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Base sequence studies of 300 nucleotide renatured repeated human DNA clones.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900838-6

10.1016/S0022-2836(03)00838-6

7 January 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946351%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

1 reference