Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q31010651)
Watch
English
HiFive: a tool suite for easy and efficient HiC and 5C data analysis
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
title
HiFive: a tool suite for easy and efficient HiC and 5C data analysis
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
main subject
data analysis
0 references
author
James Taylor
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
Michael Sauria
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
Jennifer E Phillips-Cremins
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
author name string
Victor G Corces
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
publication date
24 October 2015
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
published in
Genome Biology
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
volume
16
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
page(s)
237
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
exact match
https://scigraph.springernature.com/pub.10.1186/s13059-015-0806-y
0 references
cites work
A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Hi-Corrector: a fast, scalable and memory-efficient package for normalizing large-scale Hi-C data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Organization of the mitotic chromosome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
A high-resolution map of the three-dimensional chromatin interactome in human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Histone modifications for human epigenome analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
The bromodomain protein Brd4 insulates chromatin from DNA damage signalling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Architectural protein subclasses shape 3D organization of genomes during lineage commitment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Epigenetic programming and reprogramming during development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Bayesian inference of spatial organizations of chromosomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
HiCNorm: removing biases in Hi-C data via Poisson regression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Normalization of a chromosomal contact map.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
HiTC: exploration of high-throughput 'C' experiments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Spatial partitioning of the regulatory landscape of the X-inactivation centre
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Topological domains in mammalian genomes identified by analysis of chromatin interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Genome architectures revealed by tethered chromosome conformation capture and population-based modeling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Three-dimensional modeling of chromatin structure from interaction frequency data using Markov chain Monte Carlo sampling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Co-occupancy by multiple cardiac transcription factors identifies transcriptional enhancers active in heart.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Chromatin interaction analysis using paired-end tag sequencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Combinatorial binding predicts spatio-temporal cis-regulatory activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Determining spatial chromatin organization of large genomic regions using 5C technology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
Capturing chromosome conformation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
The hardwiring of development: organization and function of genomic regulatory systems.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410870
retrieved
28 July 2018
DNA methylation, epigenetics, and evolution in vertebrates: facts and challenges
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2FS13059-015-0806-Y
retrieved
21 January 2018
Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2FS13059-015-0806-Y
retrieved
21 January 2018
Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2FS13059-015-0806-Y
retrieved
21 January 2018
Iterative correction of Hi-C data reveals hallmarks of chromosome organization
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2FS13059-015-0806-Y
retrieved
21 January 2018
Identifiers
DOI
10.1186/S13059-015-0806-Y
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
Dimensions Publication ID
1036370983
0 references
PMC publication ID
5410870
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
PubMed publication ID
26498826
1 reference
stated in
Europe PubMed Central
PMC publication ID
5410870
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26498826%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit