(Q31072528)

25 September 2017

Sequence-specific Rho-RNA interactions in transcription termination (English)

1 reference

25 September 2017

James E Graham

1

1 reference

PMC publication ID

434436

25 September 2017

language of work or name

English

0 references

publication date

4 June 2004

1 reference

25 September 2017

Nucleic Acids Research

1 reference

25 September 2017

32

1 reference

25 September 2017

10

1 reference

25 September 2017

3093-3100

1 reference

Loading Rho to terminate transcription

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Structure of the Rho transcription terminator: mechanism of mRNA recognition and helicase loading

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Processive antitermination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Analysis of complete genomes suggests that many prokaryotes do not rely on hairpin formation in transcription termination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

A simple polypyrimidine repeat acts as an artificial Rho-dependent terminator in vivo and in vitro.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Specific binding of Escherichia coli ribosomal protein S1 to boxA transcriptional antiterminator RNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Kinetics of the RNA-DNA helicase activity of Escherichia coli transcription termination factor rho. 2. Processivity, ATP consumption, and RNA binding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Transcription antitermination: the lambda paradigm updated

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Ribosomal RNA antitermination in vitro: requirement for Nus factors and one or more unidentified cellular components.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Control of transcription termination by RNA-binding proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Transcriptional antitermination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Deletion analysis of the lambda tR1 termination region. Effect of sequences near the transcript release sites, and the minimum length of rho-dependent transcripts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Biochemistry of deoxyribonucleic acid-defective amber mutants of bacteriophage T4. 3. Nucleotide pools.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Interaction of rho factor with bacteriophage lambda cro gene transcripts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Sequence elements essential for rho-dependent transcription termination at lambda tR1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

A complete library of point substitution mutations in the glucocorticoid response element of mouse mammary tumor virus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Rho-dependent transcription termination at lambda R1 requires upstream sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Thermodynamic and enzymological characterization of the interaction between transcription termination factor rho and lambda cro mRNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

RNA sequence and secondary structure requirements for rho-dependent transcription termination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Structural and functional properties of the segments of lambda cro mRNA that interact with transcription termination factor Rho.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Lambda nutR mutations convert HK022 Nun protein from a transcription termination factor to a suppressor of termination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Preventing the synthesis of unused transcripts by Rho factor

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Rho-dependent transcription termination. Characterization of the requirement for cytidine in the nascent transcript

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Enhancement of transcription termination factor rho activity with potassium glutamate

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

A consensus motif common to all rho-dependent prokaryotic transcription terminators

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Host factor requirements for processive antitermination of transcription and suppression of pausing by the N protein of bacteriophage lambda

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Effects of decreased cytosine content on rho interaction with the rho-dependent terminator trp t' in Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Rho-dependent termination within the trp t' terminator. I. Effects of rho loading and template sequence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

rut Sites in the nascent transcript mediate Rho-dependent transcription termination in vivo

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Rho-dependent termination of transcription is governed primarily by the upstream Rho utilization (rut) sequences of a terminator

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Bacteriophage lambda N-dependent transcription antitermination. Competition for an RNA site may regulate antitermination.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Recognition of boxA antiterminator RNA by the E. coli antitermination factors NusB and ribosomal protein S10.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

An elongation control particle containing the N gene transcriptional antitermination protein of bacteriophage lambda.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=434436

Rho-dependent termination and concomitant NTPase activity requires a specific, intact RNA region

25 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15181174

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Antitermination of characterized transcriptional terminators by the Escherichia coli rrnG leader region

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15181174

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Nascent RNA in transcription complexes interacts with CspE, a small protein in E. coli implicated in chromatin condensation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15181174

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKH630

1 reference

25 September 2017

1 reference

PMC publication ID

434436

25 September 2017

PubMed publication ID

15181174

1 reference

PMC publication ID

434436