(Q31084839)

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A method for analysis and design of metabolism using metabolomics data and kinetic models: Application on lipidomics using a novel kinetic model of sphingolipid metabolism.

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3 April 2020

A method for analysis and design of metabolism using metabolomics data and kinetic models: Application on lipidomics using a novel kinetic model of sphingolipid metabolism (English)

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3 April 2020

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Vassily Hatzimanikatis

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3 April 2020

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Georgios Savoglidis

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3 April 2020

Aline Xavier da Silveira Dos Santos

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3 April 2020

Isabelle Riezman

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3 April 2020

Paolo Angelino

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3 April 2020

Howard Riezman

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23 April 2016

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3 April 2020

Metabolic Engineering

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3 April 2020

37

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3 April 2020

46-62

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3 April 2020

Metabolic control design.

1 reference

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7 January 2021

Kinetic models in industrial biotechnology - Improving cell factory performance

1 reference

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Simulation and validation of modelled sphingolipid metabolism in Saccharomyces cerevisiae

1 reference

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7 January 2021

Coordination of the dynamics of yeast sphingolipid metabolism during the diauxic shift.

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Lipid rafts function in biosynthetic delivery of proteins to the cell surface in yeast

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Inverse metabolic engineering: A strategy for directed genetic engineering of useful phenotypes.

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Functions of lipid rafts in biological membranes

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Towards kinetic modeling of genome-scale metabolic networks without sacrificing stoichiometric, thermodynamic and physiological constraints.

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Comparative lipidomic analysis of mouse and human brain with Alzheimer disease.

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Reverse engineering of biological complexity

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Establishing a platform cell factory through engineering of yeast acetyl-CoA metabolism

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Systematic lipidomic analysis of yeast protein kinase and phosphatase mutants reveals novel insights into regulation of lipid homeostasis

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Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks

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Sphingolipid functions in Saccharomyces cerevisiae

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7 January 2021

Lipid droplets finally get a little R-E-S-P-E-C-T.

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Metabolic control and its analysis. Additional relationships between elasticities and control coefficients.

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Tradeoff between enzyme and metabolite efficiency maintains metabolic homeostasis upon perturbations in enzyme capacity.

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https://api.crossref.org/works/10.1016%2FJ.YMBEN.2016.04.002

7 January 2021

Mutant analysis reveals complex regulation of sphingolipid long chain base phosphates and long chain bases during heat stress in yeast

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https://api.crossref.org/works/10.1016%2FJ.YMBEN.2016.04.002

7 January 2021

Lcb4p is a key regulator of ceramide synthesis from exogenous long chain sphingoid base in Saccharomyces cerevisiae

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7 January 2021

Inferring genetic networks and identifying compound mode of action via expression profiling

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7 January 2021

Functional interactions between sphingolipids and sterols in biological membranes regulating cell physiology

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7 January 2021

Integration of lipidomics and transcriptomics data towards a systems biology model of sphingolipid metabolism

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7 January 2021

Hydroxylation of Saccharomyces cerevisiae ceramides requires Sur2p and Scs7p

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7 January 2021

Nonlinear metabolic control analysis.

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7 January 2021

MCA has more to say.

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7 January 2021

Effects of spatiotemporal variations on metabolic control: approximate analysis using (log)linear kinetic models

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7 January 2021

A Linear Steady-State Treatment of Enzymatic Chains. Critique of the Crossover Theorem and a General Procedure to Identify Interaction Sites with an Effector

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7 January 2021

Thermodynamics-based metabolic flux analysis

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7 January 2021

Proteomics: theoretical and experimental considerations.

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7 January 2021

Dynamical analysis of gene networks requires both mRNA and protein expression information.

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7 January 2021

Principles of transcriptional control in the metabolic network of Saccharomyces cerevisiae

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7 January 2021

Group contribution method for thermodynamic analysis of complex metabolic networks

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7 January 2021

Involvement of yeast sphingolipids in the heat stress response of Saccharomyces cerevisiae

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7 January 2021

Structure of fungal fatty acid synthase and implications for iterative substrate shuttling

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Metabolic design: How to engineer a living cell to desired metabolite concentrations and fluxes

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Ceramide/long-chain base phosphate rheostat in Saccharomyces cerevisiae: regulation of ceramide synthesis by Elo3p and Cka2p

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7 January 2021

Sphingolipid metabolism diseases

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7 January 2021

Microbial acetyl-CoA metabolism and metabolic engineering

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Bringing metabolic networks to life: convenience rate law and thermodynamic constraints

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7 January 2021

Lipid rafts as a membrane-organizing principle

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Insights into the relation between mrna and protein expression patterns: II. Experimental observations in Escherichia coli

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7 January 2021

Sphingoid base 1-phosphate phosphatase: a key regulator of sphingolipid metabolism and stress response.

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7 January 2021

Identification and characterization of Saccharomyces cerevisiae dihydrosphingosine-1-phosphate phosphatase

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Cloning of an alkaline ceramidase from Saccharomyces cerevisiae. An enzyme with reverse (CoA-independent) ceramide synthase activity

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Group contributions for estimating standard gibbs energies of formation of biochemical compounds in aqueous solution

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Correlation of mRNA and protein in complex biological samples.

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Insights into the relation between mRNA and protein expression patterns: I. Theoretical considerations.

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The LCB2 gene of Saccharomyces and the related LCB1 gene encode subunits of serine palmitoyltransferase, the initial enzyme in sphingolipid synthesis

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7 January 2021

The LCB4 (YOR171c) and LCB5 (YLR260w) genes of Saccharomyces encode sphingoid long chain base kinases

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The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism

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The utility of protein and mRNA correlation

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7 January 2021

Lipidomic profiling in mouse brain reveals differences between ages and genders, with smaller changes associated with alpha-synuclein genotype

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7 January 2021

Yeast as a model system for studying lipid homeostasis and function

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Identification of ISC1 (YER019w) as inositol phosphosphingolipid phospholipase C in Saccharomyces cerevisiae

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10.1016/J.YMBEN.2016.04.002

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27113440%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

PubMed publication ID

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27113440%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

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