(Q31144558)

20 August 2017

SPECtre: a spectral coherence--based classifier of actively translated transcripts from ribosome profiling sequence data (English)

1 reference

20 August 2017

Sang Y Chun

1

1 reference

20 August 2017

Caitlin M Rodriguez

series ordinal

2

1 reference

20 August 2017

Peter K Todd

series ordinal

3

1 reference

20 August 2017

Ryan E Mills

series ordinal

4

1 reference

20 August 2017

language of work or name

1 reference

25 November 2016

1 reference

20 August 2017

1 reference

20 August 2017

17

1 reference

20 August 2017

1

1 reference

20 August 2017

482

1 reference

Detecting actively translated open reading frames in ribosome profiling data

20 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5123373

HTSeq--a Python framework to work with high-throughput sequencing data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5123373

Ribosome profiling reveals pervasive translation outside of annotated protein-coding genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5123373

Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5123373

Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5123373

GENCODE: the reference human genome annotation for The ENCODE Project

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5123373

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5123373

Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5123373

The use of fast Fourier transform for the estimation of power spectra: A method based on time averaging over short, modified periodograms

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12859-016-1355-4

The NumPy Array: A Structure for Efficient Numerical Computation

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12859-016-1355-4

10.1186/S12859-016-1355-4

21 January 2018

Identifiers

DOI

1 reference

20 August 2017

journals/bmcbi/ChunRTM16

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

20 August 2017

PubMed publication ID

27884106

1 reference