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Accessing and integrating data and knowledge for biomedical research.
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Europe PubMed Central
PMC publication ID
2553094
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18660883%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 January 2020
review article
3 references
stated in
Europe PubMed Central
stated in
PubMed
retrieved
8 September 2020
stated in
PubMed
retrieved
8 April 2021
title
Accessing and integrating data and knowledge for biomedical research
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
2553094
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18660883%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 January 2020
main subject
medical research
1 reference
stated in
PubMed
retrieved
8 September 2020
computational biology
1 reference
stated in
PubMed
retrieved
8 April 2021
author
Anita Burgun
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
2553094
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18660883%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 January 2020
author name string
O Bodenreider
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
2553094
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18660883%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 January 2020
publication date
1 January 2008
1 reference
stated in
Europe PubMed Central
PMC publication ID
2553094
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18660883%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 January 2020
published in
Yearbook of medical informatics : Advances in an interdisciplinary science
5 references
stated in
PubMed Central
retrieved
20 June 2019
stated in
PubMed Central
retrieved
22 June 2019
stated in
Europe PubMed Central
PMC publication ID
2553094
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18660883%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 January 2020
stated in
PubMed Central
retrieved
8 September 2020
stated in
PubMed Central
retrieved
8 April 2021
page(s)
91-101
1 reference
stated in
Europe PubMed Central
PMC publication ID
2553094
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18660883%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 January 2020
cites work
Obol: integrating language and meaning in bio-ontologies
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
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21 June 2018
Genomic signatures associated with the development, progression, and outcome of prostate cancer
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
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21 June 2018
Biomedical ontologies: a functional perspective
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The (my)Grid ontology: bioinformatics service discovery
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Framework for a protein ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Subclass mapping: identifying common subtypes in independent disease data sets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The Gene Ontology project in 2008
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Characterizing the cancer genome in lung adenocarcinoma
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Large-scale analysis by SAGE reveals new mechanisms of v-erbA oncogene action
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Evaluation and integration of 49 genome-wide experiments and the prediction of previously unknown obesity-related genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
From "glycosyltransferase" to "congenital muscular dystrophy": integrating knowledge from NCBI Entrez Gene and the Gene Ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Towards a top-domain ontology for linking biomedical ontologies.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Knowledge Zone: a public repository of peer-reviewed biomedical ontologies.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Integrating biological pathways in disease ontologies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The Cancer Biomedical Informatics Grid (caBIG): infrastructure and applications for a worldwide research community.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Modeling cancer: integration of "omics" information in dynamic systems
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Bioinformatics linkage of heterogeneous clinical and genomic information in support of personalized medicine.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Using web services for linking genomic data to medical information systems
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Annotation and query of tissue microarray data using the NCI Thesaurus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Applying negative rule mining to improve genome annotation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Information theory applied to the sparse gene ontology annotation network to predict novel gene function
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
A transversal approach to predict gene product networks from ontology-based similarity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The clinical role of genetic polymorphisms in drug-metabolizing enzymes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
OBO-Edit--an ontology editor for biologists
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
caCORE version 3: Implementation of a model driven, service-oriented architecture for semantic interoperability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
OBO to OWL: a protege OWL tab to read/save OBO ontologies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Advancing translational research with the Semantic Web
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
KnowARC: enabling Grid networks for the biomedical research community.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
ImmunoGrid - the virtual human immune system project.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Meta-analysis of gene expression data: a predictor-based approach
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Biowep: a workflow enactment portal for bioinformatics applications
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Signature-based small molecule screening identifies cytosine arabinoside as an EWS/FLI modulator in Ewing sarcoma
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Trends in life science grid: from computing grid to knowledge grid
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Ontology-based annotation and query of tissue microarray data.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Mapping data elements to terminological resources for integrating biomedical data sources
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
ArrayExpress--a public database of microarray experiments and gene expression profiles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
NCBI GEO: mining tens of millions of expression profiles--database and tools update
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Anatomy of data integration
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Comparative microarray analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Medical informatics and bioinformatics: integration or evolution through scientific crises?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Enrichment of OBO ontologies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Gene expression-based chemical genomics identifies rapamycin as a modulator of MCL1 and glucocorticoid resistance
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Managing asthma in the 21st century: role of pharmacogenetics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
National Center for Biomedical Ontology: advancing biomedicine through structured organization of scientific knowledge
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
MGED standards: work in progress
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Bio-ontologies: current trends and future directions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Taverna: a tool for building and running workflows of services
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Building a European biomedical grid on cancer: the ACGT Integrated Project
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Sealife: a semantic grid browser for the life sciences applied to the study of infectious diseases.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
caGrid: design and implementation of the core architecture of the cancer biomedical informatics grid
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Novel blood biomarkers of human urinary bladder cancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
NCI Thesaurus: a semantic model integrating cancer-related clinical and molecular information
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
An agent- and ontology-based system for integrating public gene, protein, and disease databases.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Beyond the data deluge: data integration and bio-ontologies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Machine learning approaches to supporting the identification of photoreceptor-enriched genes based on expression data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The MGED Ontology: a resource for semantics-based description of microarray experiments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Creation and implications of a phenome-genome network
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
ITTACA: a new database for integrated tumor transcriptome array and clinical data analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Robust diagnosis of non-Hodgkin lymphoma phenotypes validated on gene expression data from different laboratories
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Bridging the gap between medical and bioinformatics: an ontological case study in colon carcinoma
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Desiderata for domain reference ontologies in biomedicine
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The biology of human lymphoid malignancies revealed by gene expression profiling.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
GoPubMed: exploring PubMed with the Gene Ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
A procedure for assessing GO annotation consistency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Overview of BioCreAtIvE: critical assessment of information extraction for biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
AVID: an integrative framework for discovering functional relationships among proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
A study of inter-lab and inter-platform agreement of DNA microarray data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Implications of compositionality in the gene ontology for its curation and usage
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Non-lexical approaches to identifying associative relations in the gene ontology.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Using an ontology of human anatomy to inform reasoning with geometric models.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The Stanford Microarray Database accommodates additional microarray platforms and data formats
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
NCI Thesaurus: using science-based terminology to integrate cancer research results.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Taverna: a tool for the composition and enactment of bioinformatics workflows
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Are data from different gene expression microarray platforms comparable?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Identification of platform-independent gene expression markers of cisplatin nephrotoxicity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Proposed classification of cells in the Foundational Model of Anatomy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The Unified Medical Language System (UMLS): integrating biomedical terminology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
myGrid: personalised bioinformatics on the information grid
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
A molecular signature of metastasis in primary solid tumors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Gene ontology: tool for the unification of biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
Desiderata for controlled medical vocabularies in the twenty-first century.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
21 June 2018
The influence of dose and N-acetyltransferase-2 (NAT2) genotype and phenotype on the pharmacokinetics and pharmacodynamics of isoniazid.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
31 October 2018
Meta-analysis of several gene lists for distinct types of cancer: a simple way to reveal common prognostic markers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
31 October 2018
High-resolution genome-wide mapping of genetic alterations in human glial brain tumors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
31 October 2018
Interpreting Results of Large-Scale Genetic Association Studies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2553094
retrieved
31 October 2018
Global views of leukaemia
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18660883
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Gene expression profile assays as predictors of recurrence-free survival in early-stage breast cancer: a metaanalysis
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18660883
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
PMC publication ID
2553094
1 reference
stated in
Europe PubMed Central
PMC publication ID
2553094
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18660883%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 January 2020
PubMed publication ID
18660883
1 reference
stated in
Europe PubMed Central
PMC publication ID
2553094
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18660883%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 January 2020
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