(Q31167061)

29 June 2017

title

Animal phylogenomics: multiple interspecific genome comparisons (English)

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29 June 2017

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Rob DeSalle

1

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29 June 2017

language of work or name

English

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publication date

1 January 2005

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29 June 2017

published in

Methods in Enzymology

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29 June 2017

volume

395

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29 June 2017

page(s)

104-133

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maintained by WikiProject

29 June 2017

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Single nucleotide polymorphism (SNP) discovery in mammals: a targeted-gene approach.

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Assessing the relative contribution of molecular and morphological characters in simultaneous analysis trees.

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Phylogenetic shadowing of primate sequences to find functional regions of the human genome

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Detection of potato viruses using microarray technology: towards a generic method for plant viral disease diagnosis

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Expressed sequence tag analysis in Cycas, the most primitive living seed plant

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Eubacterial phylogeny based on translational apparatus proteins

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High efficiency selection of full-length cDNA by improved biotinylated cap trapper.

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Thermostabilization and thermoactivation of thermolabile enzymes by trehalose and its application for the synthesis of full length cDNA.

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Full-length cDNA cloning and determination of mRNA 5' and 3' ends by amplification of adaptor-ligated cDNA.

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7 January 2021

Evolutionary discrimination of mammalian conserved non-genic sequences (CNGs).

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7 January 2021

Numerous potentially functional but non-genic conserved sequences on human chromosome 21

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Comparison of human chromosome 21 conserved nongenic sequences (CNGs) with the mouse and dog genomes shows that their selective constraint is independent of their genic environment

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Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis

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Horizontal gene transfer among microbial genomes: new insights from complete genome analysis

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Phylogenomics: intersection of evolution and genomics

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7 January 2021

Gastrogenomic delights: a movable feast

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7 January 2021

Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions

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7 January 2021

Intra- and interspecific variation in primate gene expression patterns

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7 January 2021

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

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7 January 2021

Testing Significance of Incongruence

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7 January 2021

Confidence Limits on Phylogenies: an Approach using the Bootstrap

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7 January 2021

Homology a personal view on some of the problems

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7 January 2021

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

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7 January 2021

Resolution of a supertree/supermatrix paradox

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7 January 2021

Combined support for wholesale taxic atavism in gavialine crocodylians

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7 January 2021

Consed: a graphical tool for sequence finishing

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7 January 2021

Resequencing and mutational analysis using oligonucleotide microarrays

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7 January 2021

Putative SNP discovery in interspecific hybrids of catfish by comparative EST analysis

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7 January 2021

Biological identifications through DNA barcodes

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7 January 2021

Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species

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Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis

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7 January 2021

CAP3: A DNA sequence assembly program

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Large-scale and automated DNA sequence determination

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7 January 2021

Detection of large-scale variation in the human genome

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7 January 2021

SHOT: a web server for the construction of genome phylogenies

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7 January 2021

EST analysis of the cnidarian Acropora millepora reveals extensive gene loss and rapid sequence divergence in the model invertebrates

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7 January 2021

The closest BLAST hit is often not the nearest neighbor.

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7 January 2021

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7 January 2021

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7 January 2021

Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization

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Representational oligonucleotide microarray analysis: a high-resolution method to detect genome copy number variation

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Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes.

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7 January 2021

Archaeal phylogeny based on ribosomal proteins

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7 January 2021

Multiplex detection of single-nucleotide variations using molecular beacons

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7 January 2021

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7 January 2021

Sequence variation in genes and genomic DNA: methods for large-scale analysis

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Specific enzymatic amplification of DNA in vitro: the polymerase chain reaction

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Resolution of the early placental mammal radiation using Bayesian phylogenetics

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Molecular phylogenetics and the origins of placental mammals

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7 January 2021

Phylogeny of plastids based on cladistic analysis of gene loss inferred from complete plastid genome sequences

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Improved tools for biological sequence comparison

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7 January 2021

Multiple sequence alignment in phylogenetic analysis

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7 January 2021

Evolution of gene expression in the Drosophila melanogaster subgroup.

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7 January 2021

The ring of life provides evidence for a genome fusion origin of eukaryotes

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7 January 2021

Genome-scale approaches to resolving incongruence in molecular phylogenies

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7 January 2021

MrBayes 3: Bayesian phylogenetic inference under mixed models

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7 January 2021

Expressed sequence tags: alternative or complement to whole genome sequences?

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7 January 2021

Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase

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An automated phylogenetic key for classifying homeoboxes

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7 January 2021

A decade of progress in plant molecular phylogenetics

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7 January 2021

Large-scale copy number polymorphism in the human genome

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7 January 2021

Genome phylogeny based on gene content

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7 January 2021

Genomes in Flux: The Evolution of Archaeal and Proteobacterial Gene Content

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7 January 2021

DNA chips: analysing sequence by hybridization to oligonucleotides on a large scale

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7 January 2021

Phylogenetic analyses do not support horizontal gene transfers from bacteria to vertebrates

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7 January 2021

Comparison of EST libraries from seven beetle species: towards a framework for phylogenomics of the Coleoptera

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7 January 2021

Comparative analyses of multi-species sequences from targeted genomic regions

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7 January 2021

Vertebrate genome sequencing: building a backbone for comparative genomics

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7 January 2021

A comprehensive comparison of multiple sequence alignment programs

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2995008-8

7 January 2021

Molecular beacons: probes that fluoresce upon hybridization

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7 January 2021

Multicolor molecular beacons for allele discrimination

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7 January 2021

Microarray-based detection and genotyping of viral pathogens

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7 January 2021

Genome trees and the tree of life

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7 January 2021

Gene sequences useful for predicting relatedness of whole genomes in bacteria

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2995008-8

7 January 2021

Oligonucleotides with fluorescent dyes at opposite ends provide a quenched probe system useful for detecting PCR product and nucleic acid hybridization

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7 January 2021

Taxonomy, DNA, and the Bar Code of Life

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7 January 2021

10.1016/S0076-6879(05)95008-8

Identifiers

DOI

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29 June 2017

1 reference