(Q33241989)

24 July 2017

title

Characterizing disease states from topological properties of transcriptional regulatory networks (English)

1 reference

24 July 2017

David P Tuck

1

1 reference

24 July 2017

Harriet M Kluger

series ordinal

2

1 reference

24 July 2017

Yuval Kluger

series ordinal

3

1 reference

24 July 2017

publication date

2 May 2006

1 reference

24 July 2017

1 reference

24 July 2017

volume

7

1 reference

24 July 2017

page(s)

236

1 reference

Can we identify cellular pathways implicated in cancer using gene expression data?

24 July 2017

cites work

1 reference

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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A common set of gene regulatory networks links metabolism and growth inhibition

21 June 2018

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21 June 2018

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21 June 2018

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Genomic analysis of regulatory network dynamics reveals large topological changes

21 June 2018

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21 June 2018

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Rac regulates thrombin-induced tissue factor expression in pulmonary artery smooth muscle cells involving the nuclear factor-kappaB pathway

21 June 2018

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Evidence for dynamically organized modularity in the yeast protein-protein interaction network

21 June 2018

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Lineage specificity of gene expression patterns

21 June 2018

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TRANSFAC, TRANSPATH and CYTOMER as starting points for an ontology of regulatory networks.

21 June 2018

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Defining transcription modules using large-scale gene expression data

21 June 2018

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Hypothesis-driven approach to predict transcriptional units from gene expression data

21 June 2018

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21 June 2018

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Global organization of metabolic fluxes in the bacterium Escherichia coli

21 June 2018

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Use of chromatin immunoprecipitation assays in genome-wide location analysis of mammalian transcription factors

21 June 2018

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Global mapping of the yeast genetic interaction network

21 June 2018

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21 June 2018

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Network biology: understanding the cell's functional organization

21 June 2018

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Network component analysis: reconstruction of regulatory signals in biological systems

21 June 2018

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Previously unidentified changes in renal cell carcinoma gene expression identified by parametric analysis of microarray data

21 June 2018

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Reconciling Gene Expression Data With Known Genome-Scale Regulatory Network Structures

21 June 2018

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Inferring genetic networks and identifying compound mode of action via expression profiling

21 June 2018

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21 June 2018

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A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells

21 June 2018

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Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

21 June 2018

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21 June 2018

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21 June 2018

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A classification-based machine learning approach for the analysis of genome-wide expression data

21 June 2018

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Expression profiling predicts outcome in breast cancer

21 June 2018

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TRANSFAC: transcriptional regulation, from patterns to profiles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

A gene-expression signature as a predictor of survival in breast cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

Reverse engineering gene networks using singular value decomposition and robust regression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

Gene expression profiling predicts clinical outcome of breast cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

E2F integrates cell cycle progression with DNA repair, replication, and G(2)/M checkpoints

21 June 2018

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Lethality and centrality in protein networks

21 June 2018

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Two critical hits for promyelocytic leukemia

21 June 2018

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Egr-1, a master switch coordinating upregulation of divergent gene families underlying ischemic stress

21 June 2018

1 reference

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Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions

21 June 2018

1 reference

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Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

21 June 2018

1 reference

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Reconstructing biological networks using conditional correlation analysis

21 June 2018

1 reference

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Prognostically useful gene-expression profiles in acute myeloid leukemia.

31 October 2018

1 reference

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A cis element in the recombination activating gene locus regulates gene expression by counteracting a distant silencer

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

Robust identification of large genetic networks

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

Computational discovery of gene modules and regulatory networks

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

CREME: a framework for identifying cis-regulatory modules in human-mouse conserved segments

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

Gene expression predictors of breast cancer outcomes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

Combining pathway analysis with flux balance analysis for the comprehensive study of metabolic systems

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482723

Sequence conservation of RAG-1 and RAG-2 genes in hematologic malignancies

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16670008

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-7-236

1 reference

24 July 2017

DBLP publication ID

journals/bmcbi/TuckKK06

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

24 July 2017

1 reference