(Q33244118)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

title

Effect of 5'UTR introns on gene expression in Arabidopsis thaliana (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

0 references

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

Cas Simons

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

Andrew E. Firth

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

Christopher Brown

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

author name string

Betty Y W Chung

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

language of work or name

English

0 references

publication date

19 May 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

page(s)

120

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 2.0 Generic

21 January 2020

copyright license

start time

19 May 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-7-120

0 references

cites work

''R"--project for statistical computing

1 reference

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The evolution of spliceosomal introns: patterns, puzzles and progress

21 June 2018

1 reference

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Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants

21 June 2018

1 reference

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Folding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast

21 June 2018

1 reference

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Gametophytic selection in Arabidopsis thaliana supports the selective model of intron length reduction

21 June 2018

1 reference

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Plant gene expression in the age of systems biology: integrating transcriptional and post-transcriptional events.

21 June 2018

1 reference

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Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells

21 June 2018

1 reference

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WebLogo: A Sequence Logo Generator

21 June 2018

1 reference

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Genetic analysis of RNA-mediated transcriptional gene silencing.

21 June 2018

1 reference

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Splicing enhances translation in mammalian cells: an additional function of the exon junction complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

MicroRNAs: genomics, biogenesis, mechanism, and function

21 June 2018

1 reference

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21 June 2018

1 reference

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The origins of genome complexity

21 June 2018

1 reference

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Exon junction complexes mediate the enhancing effect of splicing on mRNA expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Retracted: An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community

21 June 2018

1 reference

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On biased distribution of introns in various eukaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

A long leader intron of the Ostub16 rice beta-tubulin gene is required for high-level gene expression and can autonomously promote transcription both in vivo and in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Splicing signals and factors in plant intron removal

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Pre-mRNA splicing alters mRNP composition: evidence for stable association of proteins at exon-exon junctions

21 June 2018

1 reference

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Pre-mRNA splicing in higher plants.

21 June 2018

1 reference

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Intron-mediated enhancement of gene expression independent of unique intron sequences and splicing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Statistical analysis of the exon-intron structure of higher and lower eukaryote genes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

A species of small antisense RNA in posttranscriptional gene silencing in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Intron-exon structures of eukaryotic model organisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

21 June 2018

1 reference

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A rule for termination-codon position within intron-containing genes: when nonsense affects RNA abundance

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Intron-mediated enhancement of transgene expression in maize is a nuclear, gene-dependent process.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Introns act post-transcriptionally to increase expression of the Arabidopsis thaliana tryptophan pathway gene PAT1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Introns and reading frames: correlation between splicing sites and their codon positions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Intron phase correlations and the evolution of the intron/exon structure of genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Intron creation and polyadenylation in maize are directed by AU-rich RNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Introns increase gene expression in cultured maize cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

cis-acting elements involved in photoregulation of an oat phytochrome promoter in rice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Prediction of human mRNA donor and acceptor sites from the DNA sequence.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

The combination of a novel stimulatory element in the first exon of the maize Shrunken-1 gene with the following intron 1 enhances reporter gene expression up to 1000-fold

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Cis and trans-acting elements involved in the activation of Arabidopsis thaliana A1 gene encoding the translation elongation factor EF-1 alpha

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Intervening sequences increase efficiency of RNA 3' processing and accumulation of cytoplasmic RNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

The effect of intron location on intron-mediated enhancement of gene expression in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Dual functionality of a plant U-rich intronic sequence element

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

pGreen: a versatile and flexible binary Ti vector for Agrobacterium-mediated plant transformation.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Intron-genome size relationship on a large evolutionary scale

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Sequences downstream of translation start regulate quantitative expression of two petunia rbcS genes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482700

Addition of A- and U-rich sequence increases the splicing efficiency of a deleted form of a maize intron

31 October 2018

1 reference

12 December 2020

Modular organization and development activity of an Arabidopsis thaliana EF-1 alpha gene promoter

1 reference

12 December 2020

Tissue-dependent enhancement of transgene expression by introns of replacement histone H3 genes of Arabidopsis

1 reference

12 December 2020

Adenovirus amazes at Cold Spring Harbor

1 reference

12 December 2020

The activation process of Arabidopsis thaliana A1 gene encoding the translation elongation factor EF-1 alpha is conserved among angiosperms

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-7-120

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

21 January 2020

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-7-120

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16712733%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

1 reference