(Q33255921)

24 July 2017

title

The folding mechanism of collagen-like model peptides explored through detailed molecular simulations (English)

1 reference

24 July 2017

Collin M Stultz

1

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24 July 2017

publication date

1 September 2006

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24 July 2017

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24 July 2017

volume

15

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24 July 2017

issue

9

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24 July 2017

page(s)

2166-2177

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Collagen triple-helix formation in all-trans chains proceeds by a nucleation/growth mechanism with a purely entropic barrier

24 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242609

Characterization of the molten globule state of retinol-binding protein using a molecular dynamics simulation approach

21 June 2018

1 reference

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Dissociation of an antiviral compound from the internal pocket of human rhinovirus 14 capsid.

21 June 2018

1 reference

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Molecular structure of the collagen triple helix

21 June 2018

1 reference

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21 June 2018

Osteogenesis imperfecta

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Unfolding of the cold shock protein studied with biased molecular dynamics

21 June 2018

1 reference

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Forces and energetics of hapten-antibody dissociation: a biased molecular dynamics simulation study

21 June 2018

1 reference

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Nuclear magnetic resonance characterization of peptide models of collagen-folding diseases

21 June 2018

1 reference

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Destabilization of osteogenesis imperfecta collagen-like model peptides correlates with the identity of the residue replacing glycine

21 June 2018

1 reference

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21 June 2018

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1 reference

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Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations

21 June 2018

1 reference

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Effective energy function for proteins in solution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242609

VMD: visual molecular dynamics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242609

Crystal and molecular structure of a collagen-like peptide at 1.9 A resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242609

Characterization of three osteogenesis imperfecta collagen alpha 1(I) glycine to serine mutations demonstrating a position-dependent gradient of phenotypic severity

21 June 2018

1 reference

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Structure of a mutant T=1 capsid of Sesbania mosaic virus: role of water molecules in capsid architecture and integrity

21 June 2018

1 reference

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Transformation of the mechanism of triple-helix peptide folding in the absence of a C-terminal nucleation domain and its implications for mutations in collagen disorders

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242609

Generalized born model with a simple smoothing function.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242609

Nucleation and propagation of the collagen triple helix in single-chain and trimerized peptides: transition from third to first order kinetics

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242609

Conformational transitions using molecular dynamics with minimum biasing.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242609

Site-specific NMR monitoring of cis-trans isomerization in the folding of the proline-rich collagen triple helix

31 October 2018

1 reference

12 December 2020

Localized unfolding of collagen explains collagenase cleavage near imino-poor sites

1 reference

12 December 2020

Collagen triple helix formation can be nucleated at either end

1 reference

12 December 2020

Molecular dynamics of native protein. II. Analysis and nature of motion

1 reference

12 December 2020

Solvent effects on protein motion and protein effects on solvent motion. Dynamics of the active site region of lysozyme

1 reference

12 December 2020

Mutations that substitute serine for glycine alpha 1-598 and glycine alpha 1-631 in type I procollagen. The effects on thermal unfolding of the triple helix are position-specific and demonstrate that the protein unfolds through a series of cooperati

1 reference

12 December 2020

Hydration of protein-protein interfaces

1 reference

12 December 2020

Identifiers

DOI

10.1110/PS.062124606

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24 July 2017

1 reference

24 July 2017

1 reference