(Q33256611)

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Comparison of two fingerprinting techniques, terminal restriction fragment length polymorphism and automated ribosomal intergenic spacer analysis, for determination of bacterial diversity in aquatic environments

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

Comparison of two fingerprinting techniques, terminal restriction fragment length polymorphism and automated ribosomal intergenic spacer analysis, for determination of bacterial diversity in aquatic environments (English)

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

1 reference

based on heuristic

inferred from title

author name string

Danovaro R

1

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

Luna GM

2

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

Dell'anno A

3

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

Pietrangeli B

4

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

language of work or name

0 references

publication date

1 September 2006

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

Applied and Environmental Microbiology

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

72

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

9

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

5982-5989

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

New threshold and confidence estimates for terminal restriction fragment length polymorphism analysis of complex bacterial communities

1 reference

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DNA extraction procedure: a critical issue for bacterial diversity assessment in marine sediments

1 reference

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Redox fluctuation structures microbial communities in a wet tropical soil

1 reference

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1 reference

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16S-23S rRNA gene internal transcribed spacer sequences for analysis of the phylogenetic relationships among species of the genus Porphyromonas.

1 reference

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Application of a newly developed ARB software-integrated tool for in silico terminal restriction fragment length polymorphism analysis reveals the dominance of a novel pmoA cluster in a forest soil.

1 reference

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Geographic and environmental sources of variation in lake bacterial community composition

1 reference

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Simultaneous recovery of extracellular and intracellular DNA suitable for molecular studies from marine sediments

1 reference

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characterization of bacterial community diversity in cystic fibrosis lung infections by use of 16s ribosomal DNA terminal restriction fragment length polymorphism profiling

1 reference

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Bacterial diversity in deep Mediterranean sediments: relationship with the active bacterial fraction and substrate availability.

1 reference

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Richness and diversity of bacterioplankton species along an estuarine gradient in Moreton Bay, Australia

1 reference

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Environmental genome shotgun sequencing of the Sargasso Sea

1 reference

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Impact of virioplankton on archaeal and bacterial community richness as assessed in seawater batch cultures.

1 reference

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Within- and between-lake variability in the composition of bacterioplankton communities: investigations using multiple spatial scales.

1 reference

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Web-based phylogenetic assignment tool for analysis of terminal restriction fragment length polymorphism profiles of microbial communities

1 reference

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Nature of polymorphisms in 16S-23S rRNA gene intergenic transcribed spacer fingerprinting of Bacillus and related genera

1 reference

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Rapid identification of bacteria from positive blood cultures by terminal restriction fragment length polymorphism profile analysis of the 16S rRNA gene.

1 reference

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Bacterial diversity in cases of lung infection in cystic fibrosis patients: 16S ribosomal DNA (rDNA) length heterogeneity PCR and 16S rDNA terminal restriction fragment length polymorphism profiling.

1 reference

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Terminal restriction fragment length polymorphism data analysis for quantitative comparison of microbial communities

1 reference

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1 reference

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PCR-SSCP comparison of 16S rDNA sequence diversity in soil DNA obtained using different isolation and purification methods

1 reference

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21 June 2018

The identification of microorganisms by fluorescence in situ hybridisation

1 reference

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21 June 2018

Characterization of depth-related population variation in microbial communities of a coastal marine sediment using 16S rDNA-based approaches and quinone profiling

1 reference

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21 June 2018

Evaluation of PCR-generated chimeras, mutations, and heteroduplexes with 16S rRNA gene-based cloning

1 reference

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21 June 2018

Phylogenetic Specificity and Reproducibility and New Method for Analysis of Terminal Restriction Fragment Profiles of 16S rRNA Genes from Bacterial Communities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563681

21 June 2018

rrndb: the Ribosomal RNA Operon Copy Number Database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563681

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Ecology and evolution of bacterial microdiversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563681

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Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis

1 reference

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Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities.

1 reference

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Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products.

1 reference

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1 reference

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1 reference

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1 reference

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Variation of the ribosomal operon 16S-23S gene spacer region in representatives of Salmonella enterica subspecies

1 reference

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Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA.

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Specific PCR amplification for the genus Pseudomonas targeting the 3' half of 16S rDNA and the whole 16S-23S rDNA spacer

1 reference

https://pubmed.ncbi.nlm.nih.gov/16957219

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of waterborne bacteria by the analysis of 16S-23S rRNA intergenic spacer region

1 reference

https://pubmed.ncbi.nlm.nih.gov/16957219

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1128/AEM.01361-06

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Europe PubMed Central

PubMed publication ID

24 July 2017

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24 November 2022

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Europe PubMed Central

PubMed publication ID

24 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

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