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English
Quantification of the variation in percentage identity for protein sequence alignments.
scientific article
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
title
Quantification of the variation in percentage identity for protein sequence alignments
(English)
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
main subject
sequence alignment
1 reference
based on heuristic
inferred from title
author
G. P. S. Raghava
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
Geoffrey J. Barton
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
author name string
G P S Raghava
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed ID
16984632
retrieved
24 July 2017
publication date
19 September 2006
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
published in
BMC Bioinformatics
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
volume
7
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
page(s)
415
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
exact match
https://scigraph.springernature.com/pub.10.1186/1471-2105-7-415
0 references
cites work
OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
Structural features can be unconserved in proteins with similar folds. An analysis of side-chain to side-chain contacts secondary structure and accessibility.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
Comparison of methods for searching protein sequence databases.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
A general method applicable to the search for similarities in the amino acid sequence of two proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
Evaluation and improvements in the automatic alignment of protein sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
A strategy for the rapid multiple alignment of protein sequences. Confidence levels from tertiary structure comparisons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
Database of homology-derived protein structures and the structural meaning of sequence alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
14 July 2018
Estimation of P-values for global alignments of protein sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
31 October 2018
Similar amino acid sequences: chance or common ancestry?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1592310
retrieved
31 October 2018
[25] Protein multiple sequence alignment and flexible pattern matching
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16984632
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
An assessment of amino acid exchange matrices in aligning protein sequences: the twilight zone revisited
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16984632
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Percent sequence identity; the need to be explicit
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16984632
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/1471-2105-7-415
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
DBLP publication ID
journals/bmcbi/RaghavaB06
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
Dimensions Publication ID
1041755895
0 references
PMCID
1592310
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
PubMed ID
16984632
1 reference
stated in
Europe PubMed Central
PMCID
1592310
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16984632%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 December 2019
ResearchGate publication ID
6809087
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