(Q33270099)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17245489%20AND%20SRC:MED&resulttype=core&format=json

24 December 2019

review article

1 reference

title

Regulating gene expression with light-activated oligonucleotides (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17245489%20AND%20SRC:MED&resulttype=core&format=json

24 December 2019

1

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24 December 2019

author name string

Ivan J Dmochowski

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17245489%20AND%20SRC:MED&resulttype=core&format=json

24 December 2019

publication date

20 November 2006

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24 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17245489%20AND%20SRC:MED&resulttype=core&format=json

24 December 2019

volume

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17245489%20AND%20SRC:MED&resulttype=core&format=json

24 December 2019

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17245489%20AND%20SRC:MED&resulttype=core&format=json

24 December 2019

page(s)

100-110

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Structure of the rhodopsin dimer: a working model for G-protein-coupled receptors

24 December 2019

cites work

1 reference

Crystal structure of rhodopsin: A G protein-coupled receptor

21 January 2018

1 reference

Imaging intracellular fluorescent proteins at nanometer resolution

21 January 2018

1 reference

Photochemically knocking out glutamate receptors in vivo

21 January 2018

1 reference

Remote control of behavior through genetically targeted photostimulation of neurons

21 January 2018

1 reference

Peptide-small molecule hybrids via orthogonal deprotection-chemoselective conjugation to cysteine-anchored scaffolds. A model study

21 January 2018

1 reference

In situ photoactivation of a caged phosphotyrosine peptide derived from focal adhesion kinase temporarily halts lamellar extension of single migrating tumor cells.

21 January 2018

1 reference

Simultaneous triggering of protein activity and fluorescence

21 January 2018

1 reference

21 January 2018

Caged phosphoproteins

1 reference

A genetically encoded photocaged amino acid

21 January 2018

1 reference

Reversible photocontrol of DNA binding by a designed GCN4-bZIP protein

21 January 2018

1 reference

Photochemical manipulation of divalent cation levels

21 January 2018

1 reference

Synthesis, structure, and reactivity of adenosine cyclic 3',5'-phosphate-benzyltriesters

21 January 2018

1 reference

7‐(Dialkylamino)coumarin‐4‐ylmethyl‐Caged Compounds as Ultrafast and Effective Long‐Wavelength Phototriggers of 8Bromo‐Substituted Cyclic Nucleotides

21 January 2018

1 reference

Fluorescence spectroscopic quantification of the release of cyclic nucleotides from photocleavable [bis(carboxymethoxy)coumarin-4-yl]methyl esters inside cells

21 January 2018

1 reference

DMACM-caged adenosine nucleotides: ultrafast phototriggers for ATP, ADP, and AMP activated by long-wavelength irradiation.

21 January 2018

1 reference

Light-activated transcription and repression by using photocaged SERMs

21 January 2018

1 reference

Light activated recombination

21 January 2018

1 reference

Controlling cell chemistry with caged compounds

21 January 2018

1 reference

Biologically active molecules with a "light switch".

21 January 2018

1 reference

Photochemical reaction mechanisms of 2-nitrobenzyl compounds: methyl ethers and caged ATP.

21 January 2018

1 reference

A new approach to time-resolved studies of ATP-requiring biological systems; laser flash photolysis of caged ATP.

21 January 2018

1 reference

Photolytic cleavage of 1-(2-nitrophenyl)ethyl ethers involves two parallel pathways and product release is rate-limited by decomposition of a common hemiacetal intermediate

21 January 2018

1 reference

Metal complex-DNA interactions: from transcription inhibition to photoactivated cleavage

21 January 2018

1 reference

Light-directed, spatially addressable parallel chemical synthesis

21 January 2018

1 reference

Light-generated oligonucleotide arrays for rapid DNA sequence analysis

21 January 2018

1 reference

Photochemical ligation of DNA conjugates through anthracene cyclodimer formation and its fidelity to the template sequences.

21 January 2018

1 reference

Photochemical approach to probing different DNA structures.

21 January 2018

1 reference

An approach to genomewide screens of expressed small interfering RNAs in mammalian cells.

21 January 2018

1 reference

Small molecule developmental screens reveal the logic and timing of vertebrate development

21 January 2018

1 reference

Regional requirements for Dishevelled signaling during Xenopus gastrulation: separable effects on blastopore closure, mesendoderm internalization and archenteron formation.

21 January 2018

1 reference

Efficient recombination in diverse tissues by a tamoxifen-inducible form of Cre: a tool for temporally regulated gene activation/inactivation in the mouse

21 January 2018

1 reference

Control of developmental timing by micrornas and their targets

21 January 2018

1 reference

An otx cis-regulatory module: a key node in the sea urchin endomesoderm gene regulatory network

21 January 2018

1 reference

Differential regulation of chordin expression domains in mutant zebrafish

21 January 2018

1 reference

The human chordin gene encodes several differentially expressed spliced variants with distinct BMP opposing activities

21 January 2018

1 reference

Morpholino oligos: making sense of antisense?

21 January 2018

1 reference

Antisense and Antigene Properties of Peptide Nucleic Acids

21 January 2018

1 reference

Targeted gene knockdown in zebrafish using negatively charged peptide nucleic acid mimics

21 January 2018

1 reference

Sequence specificity of alternating hydroyprolyl/phosphono peptide nucleic acids against zebrafish embryo mRNAs

21 January 2018

1 reference

Ligand concentration is a driver of divergent signaling and pleiotropic cellular responses to FGF.

21 January 2018

1 reference

The zebrafish Nodal signal Squint functions as a morphogen

21 January 2018

1 reference

Targeting degradation of RNA by RNase H using DNA hairpins

21 January 2018

1 reference

Photoregulation of RNA digestion by RNase H with azobenzene-tethered DNA.

21 January 2018

1 reference

Influences of mRNA secondary structure on initiation by eukaryotic ribosomes

21 January 2018

1 reference

Short-term and long-term modulation of gene expression by antisense therapeutics

21 January 2018

1 reference

Toxicology of antisense therapeutics

21 January 2018

1 reference

Ligation of oligonucleotides by pyrimidine dimers—a missing ‘link’ in the origin of life?

21 January 2018

1 reference

Rapid photolytic release of adenosine 5'-triphosphate from a protected analog: utilization by the sodium:potassium pump of human red blood cell ghosts

21 January 2018

1 reference

Relaxation of muscle fibres by photolysis of caged ATP.

21 January 2018

1 reference

Half-life and DNA strand scission products of 2-deoxyribonolactone oxidative DNA damage lesions

21 January 2018

1 reference

Transcriptional inhibition by an oxidized abasic site in DNA.

21 January 2018

1 reference

Light-activated RNA interference

21 January 2018

1 reference

A ribozyme for the aldol reaction

21 January 2018

1 reference

Light regulation of aptamer activity: an anti-thrombin aptamer with caged thymidine nucleobases

21 January 2018

1 reference

Photoregulation of DNA polymerase I (Klenow) with caged fluorescent oligodeoxynucleotides.

21 January 2018

1 reference

New light-sensitive nucleosides for caged DNA strand breaks.

21 January 2018

1 reference

A universal, photocleavable DNA base: nitropiperonyl 2'-deoxyriboside

21 January 2018

1 reference

A ribozyme with michaelase activity: synthesis of the substrate precursors

21 January 2018

1 reference

Modulated drug release from the stem-and-loop structured oligodeoxynucleotide upon UV-A irradiation in the presence of target DNA.

21 January 2018

1 reference

Phototriggered drug release from functionalized oligonucleotides by a molecular beacon strategy

21 January 2018

1 reference

Caged RNA: photo-control of a ribozyme reaction

21 January 2018

1 reference

Triggering DNAzymes with light: a photoactive C8 thioether-linked adenosine

21 January 2018

1 reference

Light-regulated catalysis by an RNA-cleaving deoxyribozyme

21 January 2018

1 reference

Reversible photocontrol of deoxyribozyme-catalyzed RNA cleavage under multiple-turnover conditions

21 January 2018

1 reference

Photochemical hammerhead ribozyme activation

21 January 2018

1 reference

Photocontrol of Triple-Helix Formation by Using Azobenzene-Bearing Oligo(thymidine) This work was partially supported by a Grant-in-Aid for Scientific Research from the Ministry of Education, Science, and Culture, Japan (Molecular Synchronization fo

21 January 2018

1 reference

Photoregulation of the DNA Polymerase Reaction by Oligonucleotides Bearing an Azobenzene We should like to thank Professor Kazunari Taira for valuable comments. This work was partially supported by the Grant-in-Aid for Scientific Research from the M

21 January 2018

1 reference

Photoregulation of the transcription reaction of T7 RNA polymerase by tethering an azobenzene to the promoter

21 January 2018

1 reference

NMR study on the photoresponsive DNA tethering an azobenzene. Assignment of the absolute configuration of two diastereomers and structure determination of their duplexes in the trans-form

21 January 2018

1 reference

Enantioselective Incorporation of Azobenzenes into Oligodeoxyribonucleotide for Effective Photoregulation of Duplex Formation This work was partially supported by a Grant-in-Aid for Scientific Research from the Ministry of Education, Culture, Sports

21 January 2018

1 reference

Photocontrolling peptide alpha helices.

21 January 2018

1 reference

Photochemical tools for remote control of ion channels in excitable cells

21 January 2018

1 reference

Control of DNA hybridization with photocleavable adducts

21 January 2018

1 reference

Targeting expression with light using caged DNA.

21 January 2018

1 reference

Photo-mediated gene activation using caged RNA/DNA in zebrafish embryos

21 January 2018

1 reference

Practical procedures for ectopic induction of gene expression in zebrafish embryos using Bhc-diazo-caged mRNA.

21 January 2018

1 reference

Two-photon laser scanning fluorescence microscopy

21 January 2018

1 reference

Brominated 7-hydroxycoumarin-4-ylmethyls: photolabile protecting groups with biologically useful cross-sections for two photon photolysis

21 January 2018

1 reference

Bhc-cNMPs as either water-soluble or membrane-permeant photoreleasable cyclic nucleotides for both one- and two-photon excitation

21 January 2018

1 reference

The nitrodibenzofuran chromophore: a new caging group for ultra-efficient photolysis in living cells

21 January 2018

1 reference

Release and report: a new photolabile caging system with a two-photon fluorescence reporting function

21 January 2018

1 reference

New caged coumarin fluorophores with extraordinary uncaging cross sections suitable for biological imaging applications

21 January 2018

1 reference

Combinatorial discovery of two-photon photoremovable protecting groups

21 January 2018

1 reference

State-dependent calcium signaling in dendritic spines of striatal medium spiny neurons

21 January 2018

1 reference

Rapid neurotransmitter uncaging in spatially defined patterns

21 January 2018

1 reference

Region-directed phototransfection reveals the functional significance of a dendritically synthesized transcription factor

21 January 2018

1 reference

Targeted transfection by femtosecond laser

21 January 2018

1 reference

Photoporation and cell transfection using a violet diode laser

21 January 2018

1 reference

Designing dendrimers for biological applications

21 January 2018

1 reference

Photochemical Regulation of DNA-Binding Specificity of MyoD

21 January 2018

1 reference

Site-Specific Generation of Deoxyribonolactone Lesions in DNA Oligonucleotides

21 January 2018

1 reference

Photochemical Generation of Ribose Abasic Sites in RNA Oligonucleotides

21 January 2018

1 reference