(Q33279152)

Dataset for "Continued use of retracted papers: Temporal trends in citations and (lack of) awareness of retractions shown in citation contexts in biomedicine"

25 July 2017

2 references

Continued use of retracted papers: Temporal trends in citations and (lack of) awareness of retractions shown in citation contexts in biomedicine

title

Measures of clade confidence do not correlate with accuracy of phylogenetic trees (English)

1 reference

25 July 2017

1 reference

Barry G Hall

1

1 reference

25 July 2017

Stephen J Salipante

series ordinal

2

1 reference

25 July 2017

publication date

1 March 2007

1 reference

PLOS Computational Biology

25 July 2017

published in

1 reference

25 July 2017

volume

3

1 reference

25 July 2017

issue

3

1 reference

25 July 2017

page(s)

e51

1 reference

Creative Commons Attribution 4.0 International

25 July 2017

copyright license

start time

16 March 2007

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

is retracted by

Retraction: Measures of clade confidence do not correlate with accuracy of phylogenetic trees

0 references

cites work

Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Simple and accurate estimation of ancestral protein sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

An assessment of accuracy, error, and conflict with support values from genome-scale phylogenetic data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

MrBayes 3: Bayesian phylogenetic inference under mixed models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Potential applications and pitfalls of Bayesian inference of phylogeny

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

MRBAYES: Bayesian inference of phylogenetic trees

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

A comprehensive comparison of multiple sequence alignment programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Comparison of the accuracies of several phylogenetic methods using protein and DNA sequences.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Bayesian phylogenetic inference via Markov chain Monte Carlo methods.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828704

Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. I. Four taxa with a molecular clock

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17367204

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17367204

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evolution of Protein Molecules

1 reference

30 December 2023

https://opencitations.net/index/api/v1/references/10.1371/JOURNAL.PCBI.0030051

An Empirical Test of Bootstrapping as a Method for Assessing Confidence in Phylogenetic Analysis

1 reference

30 December 2023

https://opencitations.net/index/api/v1/references/10.1371/JOURNAL.PCBI.0030051

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

30 December 2023

https://opencitations.net/index/api/v1/references/10.1371/JOURNAL.PCBI.0030051

Identifiers

DOI

10.1371/JOURNAL.PCBI.0030051

1 reference

25 July 2017

DBLP publication ID

journals/ploscb/HallS07

1 reference

DBLP Dataset 2021-01-02

release_ijcl77uifndxvki6sznv4kftje

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ijcl77uifndxvki6sznv4kftje

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

1828704

1 reference

25 July 2017

1 reference