(Q33428459)

26 July 2017

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title

Cross species analysis of microarray expression data (English)

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26 July 2017

3

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26 July 2017

Yong Lu

1

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26 July 2017

Peter Huggins

series ordinal

2

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26 July 2017

language of work or name

English

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publication date

8 April 2009

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26 July 2017

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26 July 2017

volume

25

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26 July 2017

issue

12

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26 July 2017

page(s)

1476-1483

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

26 July 2017

cites work

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14 July 2018

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Comparative evaluation of gene-set analysis methods

14 July 2018

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Combined analysis reveals a core set of cycling genes

14 July 2018

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The design and characterization of two proteins with 88% sequence identity but different structure and function

14 July 2018

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GenMAPP 2: new features and resources for pathway analysis

14 July 2018

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Network-based analysis of affected biological processes in type 2 diabetes models

14 July 2018

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Cross-species microarray analysis with the OSCAR system suggests an INSR->Pax6->NQO1 neuro-protective pathway in aging and Alzheimer's disease

14 July 2018

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Tissue-specific transcriptional regulation has diverged significantly between human and mouse

14 July 2018

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Credentialing preclinical pediatric xenograft models using gene expression and tissue microarray analysis

14 July 2018

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Co-evolution of transcriptional and post-translational cell-cycle regulation

14 July 2018

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Identifying cycling genes by combining sequence homology and expression data

14 July 2018

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Cross-species hybridizations on a multi-species cDNA microarray to identify evolutionarily conserved genes expressed in oocytes

14 July 2018

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Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

14 July 2018

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Expression profiling in primates reveals a rapid evolution of human transcription factors

14 July 2018

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WholePathwayScope: a comprehensive pathway-based analysis tool for high-throughput data

14 July 2018

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A new method to remove hybridization bias for interspecies comparison of global gene expression profiles uncovers an association between mRNA sequence divergence and differential gene expression in Xenopus

14 July 2018

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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

14 July 2018

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L2L: a simple tool for discovering the hidden significance in microarray expression data

14 July 2018

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Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees

14 July 2018

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List of lists-annotated (LOLA): a database for annotation and comparison of published microarray gene lists

14 July 2018

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The cell cycle-regulated genes of Schizosaccharomyces pombe

14 July 2018

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Microarray evaluation of dietary restriction

14 July 2018

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Multi-species microarrays reveal the effect of sequence divergence on gene expression profiles

14 July 2018

1 reference

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Conserved patterns of protein interaction in multiple species

14 July 2018

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Transcriptional regulatory code of a eukaryotic genome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732912

A gene atlas of the mouse and human protein-encoding transcriptomes

14 July 2018

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Universality and flexibility in gene expression from bacteria to human

14 July 2018

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14 July 2018

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Identification of Drosophila MicroRNA targets

14 July 2018

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yMGV: a cross-species expression data mining tool.

14 July 2018

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Multiple oscillators regulate circadian gene expression in Neurospora

14 July 2018

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A gene-coexpression network for global discovery of conserved genetic modules

14 July 2018

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Sequencing and comparison of yeast species to identify genes and regulatory elements

14 July 2018

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Generalized singular value decomposition for comparative analysis of genome-scale expression data sets of two different organisms

14 July 2018

1 reference

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Cell cycle-regulated gene expression in Arabidopsis

14 July 2018

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Identification of genes periodically expressed in the human cell cycle and their expression in tumors

14 July 2018

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Human macrophage activation programs induced by bacterial pathogens

14 July 2018

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Multiclass cancer diagnosis using tumor gene expression signatures

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732912

DNA microarray analysis of chimpanzee liver during acute resolving hepatitis C virus infection

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732912

Global analysis of the genetic network controlling a bacterial cell cycle

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732912

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732912

Basic local alignment search tool

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732912

Dissection and design of yeast prions

14 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Combining multiple microarray studies and modeling interstudy variation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Multiple-laboratory comparison of microarray platforms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Genome adaptation to chemical stress: clues from comparative transcriptomics in Saccharomyces cerevisiae and Candida glabrata.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Evolutionary conservation of expression profiles between human and mouse orthologous genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Group testing for pathway analysis improves comparability of different microarray datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Common pattern of evolution of gene expression level and protein sequence in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Using DNA microarrays to study gene expression in closely related species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Evolution of gene expression in the Drosophila melanogaster subgroup.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Periodic gene expression program of the fission yeast cell cycle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

DNA analysis indicates that Asian elephants are native to Borneo and are therefore a high priority for conservation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP247

Genetic diversity contribution to errors in short oligonucleotide microarray analysis.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732912

Comparative analysis of cell cycle regulated genes in eukaryotes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732912

Gene expression during the life cycle of Drosophila melanogaster.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732912

Comment on " 'Stemness': transcriptional profiling of embryonic and adult stem cells" and "a stem cell molecular signature"

31 October 2018

1 reference

12 December 2020

Low rates of expression profile divergence in highly expressed genes and tissue-specific genes during mammalian evolution

1 reference

12 December 2020

A genetic signature of interspecies variations in gene expression

1 reference

12 December 2020

Assessing the conservation of mammalian gene expression using high-density exon arrays

1 reference

12 December 2020

10.1093/BIOINFORMATICS/BTP247

Identifiers

DOI

1 reference

journals/bioinformatics/LuHB09

26 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

26 July 2017

1 reference