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Fpocket: an open source platform for ligand pocket detection.
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1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
review article
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stated in
Europe PubMed Central
title
Fpocket: an open source platform for ligand pocket detection
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
main subject
open-source software
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author
Pierre Tuffery
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
author name string
Vincent Le Guilloux
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
Peter Schmidtke
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
publication date
2 June 2009
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
published in
BMC Bioinformatics
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
volume
10
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
page(s)
168
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
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Pocketome via comprehensive identification and classification of ligand binding envelopes.
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21 June 2018
Automatic identification and representation of protein binding sites for molecular docking
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Detection and geometric modeling of molecular surfaces and cavities using digital mathematical morphological operations
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Pocket extraction on proteins via the Voronoi diagram of spheres.
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31 October 2018
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31 October 2018
Structure-based maximal affinity model predicts small-molecule druggability.
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31 October 2018
Travel depth, a new shape descriptor for macromolecules: application to ligand binding.
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31 October 2018
A method for localizing ligand binding pockets in protein structures
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31 October 2018
Q-SiteFinder: an energy-based method for the prediction of protein-ligand binding sites
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31 October 2018
Information decay in molecular docking screens against holo, apo, and modeled conformations of enzymes
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31 October 2018
LigandFit: a novel method for the shape-directed rapid docking of ligands to protein active sites
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31 October 2018
Fast prediction and visualization of protein binding pockets with PASS.
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31 October 2018
LIGSITE: automatic and efficient detection of potential small molecule-binding sites in proteins
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31 October 2018
A new approach to the automatic identification of candidates for ligand receptor sites in proteins: (I). Search for pocket regions.
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reference URL
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31 October 2018
Accurate Detection of Protein:Ligand Binding Sites Using Molecular Dynamics Simulations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700099
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31 October 2018
Binding Response: A Descriptor for Selecting Ligand Binding Site on Protein Surfaces
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19486540
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Effective labeling of molecular surface points for cavity detection and location of putative binding sites
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19486540
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Finding and filling protein cavities using cellular logic operations
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19486540
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/1471-2105-10-168
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
DBLP publication ID
journals/bmcbi/GuillouxST09
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
Dimensions Publication ID
1034998689
0 references
ORKG ID
R74963
0 references
PMC publication ID
2700099
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
PubMed publication ID
19486540
1 reference
stated in
Europe PubMed Central
PMC publication ID
2700099
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486540%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
ResearchGate publication ID
26257330
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