(Q33483027)

English

Independent inactivation of arginine decarboxylase genes by nonsense and missense mutations led to pseudogene formation in Chlamydia trachomatis serovar L2 and D strains

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scholarly article

1 reference

Europe PubMed Central

27 July 2017

Independent inactivation of arginine decarboxylase genes by nonsense and missense mutations led to pseudogene formation in Chlamydia trachomatis serovar L2 and D strains (English)

1 reference

Europe PubMed Central

27 July 2017

Chlamydia trachomatis

0 references

David E. Graham

3

1 reference

Europe PubMed Central

27 July 2017

author name string

Teresa N Giles

1

1 reference

Europe PubMed Central

27 July 2017

Derek J Fisher

2

1 reference

Europe PubMed Central

27 July 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

16 July 2009

1 reference

Europe PubMed Central

27 July 2017

BMC Evolutionary Biology

1 reference

Europe PubMed Central

27 July 2017

9

1 reference

Europe PubMed Central

27 July 2017

166

1 reference

Europe PubMed Central

27 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2148-9-166

0 references

Analysis of proteins in Chlamydia trachomatis L2 outer membrane complex, COMC.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Chlamydia trachomatis diversity viewed as a tissue-specific coevolutionary arms race

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Outer and inner membrane proteins compose an arginine-agmatine exchange system in Chlamydophila pneumoniae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Eliminating blinding trachoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Immunoproteomic discovery of novel T cell antigens from the obligate intracellular pathogen Chlamydia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Clustal W and Clustal X version 2.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Intracellular pathogens go extreme: genome evolution in the Rickettsiales

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Characterization of an acid-dependent arginine decarboxylase enzyme from Chlamydophila pneumoniae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Gene expression profiles of Chlamydophila pneumoniae during the developmental cycle and iron depletion-mediated persistence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

KaKs_Calculator: calculating Ka and Ks through model selection and model averaging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

PAML 4: phylogenetic analysis by maximum likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Evolution of Chlamydia trachomatis diversity occurs by widespread interstrain recombination involving hotspots.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Predicting the effects of amino acid substitutions on protein function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Comparative Genomic Analysis of Chlamydia trachomatis Oculotropic and Genitotropic Strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Frequency of spontaneous mutations that confer antibiotic resistance in Chlamydia spp.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

PMUT: a web-based tool for the annotation of pathological mutations on proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Phagocytes transmit Chlamydia pneumoniae from the lungs to the vasculature.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Illuminating the Evolutionary History of Chlamydiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Chlamydia pneumoniae multiply in neutrophil granulocytes and delay their spontaneous apoptosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Polymorphisms in Chlamydia trachomatis tryptophan synthase genes differentiate between genital and ocular isolates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Global Stage-Specific Gene Regulation during the Developmental Cycle of Chlamydia trachomatis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Molecular basis defining human Chlamydia trachomatis tissue tropism. A possible role for tryptophan synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Why are proteins so robust to site mutations?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Mechanisms of evolution in Rickettsia conorii and R. prowazekii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Predicting deleterious amino acid substitutions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Pseudogenes, junk DNA, and the dynamics of Rickettsia genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Predicting the functional consequences of non-synonymous single nucleotide polymorphisms: structure-based assessment of amino acid variation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Genome degradation is an ongoing process in Rickettsia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Interaction of Chlamydia pneumoniae and human alveolar macrophages: infection and inflammatory response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Chlamydial infection in inducible nitric oxide synthase knockout mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Chlamydia pneumoniae (TWAR).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

An epidemic of infections due to Chlamydia pneumoniae in military conscripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Biosynthesis of Arginine in L Cells Infected with Chlamydiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Differential antimicrobial activity of human mononuclear phagocytes against the human biovars of Chlamydia trachomatis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Chlamydicidal activity of human alveolar macrophages.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Amino acid requirements for growth of Chlamydia pneumoniae in cell cultures: growth enhancement by lysine or methionine depletion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

28 July 2018

Summary of notifiable diseases--United States, 2006.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

31 October 2018

Arginine-dependent gene regulation via the ArgR repressor is species specific in chlamydia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

31 October 2018

Molecular signatures of natural selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

31 October 2018

For better or worse: genomic consequences of intracellular mutualism and parasitism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

31 October 2018

Speciation in Chlamydia: genomewide phylogenetic analyses identified a reliable set of acquired genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

31 October 2018

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

31 October 2018

Genomic transcriptional profiling of the developmental cycle of Chlamydia trachomatis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

31 October 2018

Pyruvoyl-dependent arginine decarboxylase from Methanococcus jannaschii: crystal structures of the self-cleaved and S53A proenzyme forms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

31 October 2018

Comparative genomes of Chlamydia pneumoniae and C. trachomatis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2720952

31 October 2018

Reductive evolution of resident genomes.

1 reference

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31 October 2018

The ambiguous boundary between genes and pseudogenes: the dead rise up, or do they?

1 reference

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31 October 2018

Species-specific variation in signal peptide design. Implications for protein secretion in foreign hosts

1 reference

https://pubmed.ncbi.nlm.nih.gov/19607664

12 December 2020

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Site-directed alteration of Glu197 and Glu66 in a pyruvoyl-dependent histidine decarboxylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/19607664

12 December 2020

based on heuristic

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Alveolar Macrophages from Normal Subjects Lack the NOS-Related System y+for Arginine Transport

1 reference

https://pubmed.ncbi.nlm.nih.gov/19607664

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Missense mutations that inactivate Escherichia coli lac permease

1 reference

https://pubmed.ncbi.nlm.nih.gov/19607664

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2148-9-166

1 reference

Europe PubMed Central

27 July 2017

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release_7q4yqelfsbf5dl4f5adhp47tfe

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https://api.fatcat.wiki/v0/release/7q4yqelfsbf5dl4f5adhp47tfe

24 November 2022

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mapped directly with Wikidata item

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Europe PubMed Central

27 July 2017

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Europe PubMed Central

27 July 2017

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