(Q33490266)

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Screening non-coding RNAs in transcriptomes from neglected species using PORTRAIT: case study of the pathogenic fungus Paracoccidioides brasiliensis

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scholarly article

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Europe PubMed Central

27 July 2017

1 reference

Europe PubMed Central

Screening non-coding RNAs in transcriptomes from neglected species using PORTRAIT: case study of the pathogenic fungus Paracoccidioides brasiliensis (English)

1 reference

Europe PubMed Central

27 July 2017

Paracoccidioides brasiliensis

1 reference

based on heuristic

inferred from title

author name string

Roberto T Arrial

1

1 reference

Europe PubMed Central

27 July 2017

Roberto C Togawa

2

1 reference

Europe PubMed Central

27 July 2017

Marcelo de M Brigido

3

1 reference

Europe PubMed Central

27 July 2017

publication date

4 August 2009

1 reference

Europe PubMed Central

27 July 2017

BMC Bioinformatics

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Europe PubMed Central

27 July 2017

10

1 reference

Europe PubMed Central

27 July 2017

239

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Europe PubMed Central

27 July 2017

copyright license

Creative Commons Attribution 2.0 Generic

4 August 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

1 reference

April 2022 Public Data File from Crossref

https://scigraph.springernature.com/pub.10.1186/1471-2105-10-239

0 references

Diamonds in the rough: mRNA-like non-coding RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

NONCODE v2.0: decoding the non-coding

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21 June 2018

CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

RNA structure: bioinformatic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

What is a support vector machine?

1 reference

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21 June 2018

Discrimination of non-protein-coding transcripts from protein-coding mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

ANGLE: a sequencing errors resistant program for predicting protein coding regions in unfinished cDNA.

1 reference

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21 June 2018

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

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21 June 2018

Distinguishing protein-coding from non-coding RNAs through support vector machines

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21 June 2018

The Universal Protein Resource (UniProt): an expanding universe of protein information

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21 June 2018

EMBL Nucleotide Sequence Database: developments in 2005

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21 June 2018

Classification of real and pseudo microRNA precursors using local structure-sequence features and support vector machine.

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21 June 2018

Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

Transcriptional profiles of the human pathogenic fungus Paracoccidioides brasiliensis in mycelium and yeast cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

Availability of short amino acid sequences in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

RNAdb--a comprehensive mammalian noncoding RNA database

1 reference

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21 June 2018

Rfam: annotating non-coding RNAs in complete genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

BLAST: at the core of a powerful and diverse set of sequence analysis tools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

Public web-based services from the European Bioinformatics Institute

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21 June 2018

RNA regulation: a new genetics?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

Identification of putative noncoding RNAs among the RIKEN mouse full-length cDNA collection

1 reference

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21 June 2018

A computational approach to identify genes for functional RNAs in genomic sequences

1 reference

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21 June 2018

EMBOSS: the European Molecular Biology Open Software Suite

1 reference

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21 June 2018

A simple method for displaying the hydropathic character of a protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

Assessment of protein coding measures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2731755

21 June 2018

Prediction of siRNA functionality using generalized string kernel and support vector machine.

1 reference

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31 October 2018

CAST: an iterative algorithm for the complexity analysis of sequence tracts. Complexity analysis of sequence tracts.

1 reference

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31 October 2018

Identifiers

10.1186/1471-2105-10-239

1 reference

Europe PubMed Central

27 July 2017

DBLP publication ID

journals/bmcbi/ArrialTB09

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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release_liqxjweoujfoxds3ga4v5yypea

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https://api.fatcat.wiki/v0/release/liqxjweoujfoxds3ga4v5yypea

24 November 2022

based on heuristic

mapped directly with Wikidata item

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Europe PubMed Central

27 July 2017

1 reference

Europe PubMed Central

27 July 2017

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