(Q33526988)

27 July 2017

title

Evolutionary mirages: selection on binding site composition creates the illusion of conserved grammars in Drosophila enhancers (English)

1 reference

27 July 2017

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2

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27 July 2017

Richard W Lusk

1

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27 July 2017

publication date

22 January 2010

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27 July 2017

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27 July 2017

volume

6

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27 July 2017

issue

1

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27 July 2017

page(s)

e1000829

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Creative Commons Attribution 4.0 International

27 July 2017

copyright license

start time

22 January 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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21 June 2018

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Analysis of combinatorial cis-regulation in synthetic and genomic promoters

21 June 2018

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The zinc-finger protein Zelda is a key activator of the early zygotic genome in Drosophila

21 June 2018

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Sepsid even-skipped enhancers are functionally conserved in Drosophila despite lack of sequence conservation

21 June 2018

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21 June 2018

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21 June 2018

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Sequence context affects the rate of short insertions and deletions in flies and primates

21 June 2018

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Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm

21 June 2018

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The frailty of adaptive hypotheses for the origins of organismal complexity

21 June 2018

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Unmasking activation of the zygotic genome using chromosomal deletions in the Drosophila embryo

21 June 2018

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Large-scale discovery of promoter motifs in Drosophila melanogaster

21 June 2018

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Large-scale turnover of functional transcription factor binding sites in Drosophila

21 June 2018

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Bicoid cooperative DNA binding is critical for embryonic patterning in Drosophila

21 June 2018

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cis-regulatory logic of short-range transcriptional repression in Drosophila melanogaster

21 June 2018

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21 June 2018

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Transcriptional enhancers: Intelligent enhanceosomes or flexible billboards?

21 June 2018

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Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster.

21 June 2018

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Distance preferences in the arrangement of binding motifs and hierarchical levels in organization of transcription regulatory information.

21 June 2018

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CtBP-independent repression in the Drosophila embryo

21 June 2018

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Genome Size Evolution in Pufferfish: A Comparative Analysis of Diodontid and Tetraodontid Pufferfish Genomes

21 June 2018

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DNA loss and evolution of genome size in Drosophila

21 June 2018

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21 June 2018

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Evolution of transcription factor binding sites in Mammalian gene regulatory regions: conservation and turnover

21 January 2018

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21 June 2018

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The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2809757

Evidence for DNA Loss as a Determinant of Genome Size

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2809757

High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups

21 June 2018

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Functional analysis of eve stripe 2 enhancer evolution in Drosophila: rules governing conservation and change.

21 June 2018

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From gradients to stripes in Drosophila embryogenesis: filling in the gaps

21 June 2018

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Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

21 June 2018

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A gradient of bicoid protein in Drosophila embryos

21 June 2018

1 reference

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The products of the Drosophila gap genes hunchback and Krüppel bind to the hunchback promoters

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2809757

Sequence-specific DNA-binding activities of the gap proteins encoded by hunchback and Krüppel in Drosophila

21 June 2018

1 reference

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Deletions in processed pseudogenes accumulate faster in rodents than in humans

21 June 2018

1 reference

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Transcriptional regulation of a pair-rule stripe in Drosophila.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2809757

Regulation of a Segmentation Stripe by Overlapping Activators and Repressors in the Drosophila Embryo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2809757

Expected rates and modes of evolution of enhancer sequences

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000829

The words of the regulatory code are arranged in a variable manner in highly conserved enhancers.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000829

Genomic gigantism: DNA loss is slow in mountain grasshoppers

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000829

Information display by transcriptional enhancers

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20107516

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1000829

1 reference

27 July 2017

1 reference

27 July 2017

1 reference