(Q33554485)

28 July 2017

title

Contributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli (English)

1 reference

28 July 2017

0 references

C A Hirvonen

1

1 reference

28 July 2017

W Ross

2

1 reference

28 July 2017

C E Wozniak

3

1 reference

28 July 2017

E Marasco

4

1 reference

28 July 2017

J R Anthony

5

1 reference

28 July 2017

S E Aiyar

6

1 reference

28 July 2017

V H Newburn

7

1 reference

28 July 2017

R L Gourse

8

1 reference

28 July 2017

language of work or name

English

0 references

publication date

1 November 2001

1 reference

28 July 2017

published in

Journal of Bacteriology

1 reference

28 July 2017

volume

183

1 reference

28 July 2017

issue

21

1 reference

28 July 2017

page(s)

6305-6314

1 reference

describes a project that uses

28 July 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC100122/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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21 June 2018

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21 June 2018

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21 June 2018

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Structural organization of the RNA polymerase-promoter open complex

21 June 2018

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rRNA operon copy number reflects ecological strategies of bacteria

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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FIS activates sequential steps during transcription initiation at a stable RNA promoter

21 June 2018

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Flexible linker in the RNA polymerase alpha subunit facilitates the independent motion of the C-terminal activator contact domain.

21 June 2018

1 reference

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Molecular anatomy of a transcription activation patch: FIS-RNA polymerase interactions at the Escherichia coli rrnB P1 promoter

21 June 2018

1 reference

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Variable structures of Fis-DNA complexes determined by flanking DNA-protein contacts

21 June 2018

1 reference

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21 June 2018

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21 June 2018

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21 June 2018

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Depletion of functional ribosomal RNA operons in Escherichia coli causes increased expression of the remaining intact copies

21 June 2018

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21 June 2018

1 reference

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Co-regulation by bent DNA. Functional substitutions of the integration host factor site at sigma 54-dependent promoter Pu of the upper-TOL operon by intrinsically curved sequences.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Localization of the intrinsically bent DNA region upstream of the E.coli rrnB P1 promoter

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

rRNA operon multiplicity in Escherichia coli and the physiological implications of rrn inactivation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Fis activates the RpoS-dependent stationary-phase expression of proP in Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Defective antitermination of rRNA transcription and derepression of rRNA and tRNA synthesis in the nusB5 mutant of Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Isolation of the gene encoding the Hin recombinational enhancer binding protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Spatial relationship of the Fis binding sites for Hin recombinational enhancer activity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Ribosome associated protein(s) specifically bind(s) to the upstream activator sequence of the E. coli rrnA P1 promoter

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

E.coli Fis protein activates ribosomal RNA transcription in vitro and in vivo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Potential binding sites of the trans-activator FIS are present upstream of all rRNA operons and of many but not all tRNA operons

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Sequence logos: a new way to display consensus sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Sequences upstream of the-35 hexamer of rrnB P1 affect promoter strength and upstream activation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Factor-independent activation of Escherichia coli rRNA transcription. I. Kinetic analysis of the roles of the upstream activator region and supercoiling on transcription of the rrnB P1 promoter in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

The role of FIS in trans activation of stable RNA operons of E. coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Analysis of the Fis-dependent and Fis-independent transcription activation mechanisms of the Escherichia coli ribosomal RNA P1 promoter

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

The Fis protein: it's not just for DNA inversion anymore

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Comparison of the expression of the seven ribosomal RNA operons in Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

The mechanism of trans-activation of the Escherichia coli operon thrU(tufB) by the protein FIS. A model

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Information content of individual genetic sequences.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Transcription regulation by initiating NTP concentration: rRNA synthesis in bacteria.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

Mechanisms of upstream activation of the rrnD promoter P1 of Escherichia coli

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100122

The transcriptional activator protein FIS: DNA interactions and cooperative interactions with RNA polymerase at the Escherichia coli rrnB P1 promoter

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11591675

12 December 2020

inferred from PubMed ID database lookup

DNA determinants of rRNA synthesis in E. coli: growth rate dependent regulation, feedback inhibition, upstream activation, antitermination

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11591675

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1128/JB.183.21.6305-6314.2001

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ep66tvaru5gaxcplpcywx6qfju

30 July 2022

release_ep66tvaru5gaxcplpcywx6qfju

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ep66tvaru5gaxcplpcywx6qfju

30 July 2022

https://api.fatcat.wiki/v0/release/ep66tvaru5gaxcplpcywx6qfju

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/ep66tvaru5gaxcplpcywx6qfju

1 reference

30 July 2022