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MMBGX: a method for estimating expression at the isoform level and detecting differential splicing using whole-transcript Affymetrix arrays
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1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
title
MMBGX: a method for estimating expression at the isoform level and detecting differential splicing using whole-transcript Affymetrix arrays
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
author
Ernest Turro
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
Alexandra M. Lewin
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
Maggie Dallman
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
Sylvia Richardson
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
author name string
Anna Rose
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
language of work or name
English
0 references
publication date
23 October 2009
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
published in
Nucleic Acids Research
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
volume
38
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
issue
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
page(s)
e4
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
cites work
Overestimation of alternative splicing caused by variable probe characteristics in exon arrays
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
A hierarchical Bayesian model for comparing transcriptomes at the individual transcript isoform level
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
FIRMA: a method for detection of alternative splicing from exon array data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
Ensembl 2008
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
BGX: a Bioconductor package for the Bayesian integrated analysis of Affymetrix GeneChips.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
X:Map: annotation and visualization of genome structure for Affymetrix exon array analysis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
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21 June 2018
Discovery of tissue-specific exons using comprehensive human exon microarrays
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
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21 June 2018
Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
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21 June 2018
A powerful method for detecting differentially expressed genes from GeneChip arrays that does not require replicates
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
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21 June 2018
Inferring global levels of alternative splicing isoforms using a generative model of microarray data
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
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21 June 2018
Genome-wide estimation of transcript concentrations from spotted cDNA microarray data
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
BGX: a fully Bayesian integrated approach to the analysis of Affymetrix GeneChip data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
21 June 2018
Alternative splicing in disease and therapy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
31 October 2018
Gene structure-based splice variant deconvolution using a microarray platform.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2800219
retrieved
31 October 2018
Identifiers
DOI
10.1093/NAR/GKP853
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
PMC publication ID
2800219
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
PubMed publication ID
19854940
1 reference
stated in
Europe PubMed Central
PMC publication ID
2800219
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19854940%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 February 2020
ResearchGate publication ID
38034386
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