(Q33633487)

28 July 2017

title

Calibration of mutation rates reveals diverse subfamily structure of galliform CR1 repeats (English)

1 reference

28 July 2017

George E Liu

1

1 reference

28 July 2017

Lu Jiang

2

1 reference

28 July 2017

Fei Tian

3

1 reference

28 July 2017

Bin Zhu

4

1 reference

28 July 2017

Jiuzhou Song

5

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28 July 2017

publication date

27 May 2009

1 reference

Genome Biology and Evolution

28 July 2017

published in

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28 July 2017

volume

1

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28 July 2017

page(s)

119-130

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Whole genome comparative studies between chicken and turkey and their implications for avian genome evolution

28 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Biased distributions and decay of long interspersed nuclear elements in the chicken genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Evolutionary history of mammalian transposons determined by genome-wide defragmentation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Phylogenomic investigation of CR1 LINE diversity in reptiles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Specific chicken repeat 1 (CR1) retrotransposon insertion suggests phylogenetic affinity of rockfowls (genus Picathartes) to crows and ravens (Corvidae).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

The rise and fall of the CR1 subfamily in the lineage leading to penguins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

A recent chicken repeat 1 retrotransposition confirms the Coscoroba-Cape Barren goose clade

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Comparison of the chicken and turkey genomes reveals a higher rate of nucleotide divergence on microchromosomes than macrochromosomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Whole-genome analysis of Alu repeat elements reveals complex evolutionary history

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

The repetitive landscape of the chicken genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Automated de novo identification of repeat sequence families in sequenced genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

A bird's-eye view of the C-value enigma: genome size, cell size, and metabolic rate in the class aves

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

MEGA2: molecular evolutionary genetics analysis software

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Interspersed repeats and other mementos of transposable elements in mammalian genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Evolution of chicken repeat 1 (CR1) elements: evidence for ancient subfamilies and multiple progenitors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

Subfamilies of CR1 non-LTR retrotransposons have different 5'UTR sequences but are otherwise conserved

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2817409

30 October 2018

Identifiers

DOI

10.1093/GBE/EVP014

1 reference

28 July 2017

1 reference

28 July 2017

1 reference