(Q33701063)

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Identification of candidate risk gene variations by whole-genome sequence analysis of four rat strains commonly used in inflammation research

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scholarly article

1 reference

Europe PubMed Central

28 July 2017

Identification of candidate risk gene variations by whole-genome sequence analysis of four rat strains commonly used in inflammation research (English)

1 reference

Europe PubMed Central

28 July 2017

whole genome sequencing

1 reference

based on heuristic

inferred from title

author name string

Liselotte Bäckdahl

1

1 reference

Europe PubMed Central

28 July 2017

Diana Ekman

2

1 reference

Europe PubMed Central

28 July 2017

Maja Jagodic

3

1 reference

Europe PubMed Central

28 July 2017

Tomas Olsson

4

1 reference

Europe PubMed Central

28 July 2017

Rikard Holmdahl

5

1 reference

Europe PubMed Central

28 July 2017

language of work or name

0 references

publication date

21 May 2014

1 reference

Europe PubMed Central

28 July 2017

1 reference

Europe PubMed Central

28 July 2017

15

1 reference

Europe PubMed Central

28 July 2017

391

1 reference

Europe PubMed Central

28 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2164-15-391

0 references

Combined sequence-based and genetic mapping analysis of complex traits in outbred rats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Expression of Ccl11 associates with immune response modulation and protection against neuroinflammation in rats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Genetic basis of transcriptome differences between the founder strains of the rat HXB/BXH recombinant inbred panel.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Positioning of a polymorphic quantitative trait nucleotide in the Ncf1 gene controlling oxidative burst response and arthritis severity in rats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Fine-mapping resolves Eae23 into two QTLs and implicates ZEB1 as a candidate gene regulating experimental neuroinflammation in rat.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Alternative splicing and transcriptome profiling of experimental autoimmune encephalomyelitis using genome-wide exon arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Genetic variants of CC chemokine genes in experimental autoimmune encephalomyelitis, multiple sclerosis and rheumatoid arthritis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Finding the missing heritability of complex diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

The Sequence Alignment/Map format and SAMtools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

High resolution mapping of expression QTLs in heterogeneous stock mice in multiple tissues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Definition of arthritis candidate risk genes by combining rat linkage-mapping results with human case-control association data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Positional cloning of the Igl genes controlling rheumatoid factor production and allergic bronchitis in rats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Common genetic determinants of uveitis shared with other autoimmune disorders

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

SNP and haplotype mapping for genetic analysis in the rat.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Defining the role of the MHC in autoimmunity: a review and pooled analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Association of arthritis with a gene complex encoding C-type lectin-like receptors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

The neurobiology of multiple sclerosis: genes, inflammation, and neurodegeneration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Advanced intercross line mapping of Eae5 reveals Ncf-1 and CLDN4 as candidate genes for experimental autoimmune encephalomyelitis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Definition of a 1.06-Mb region linked to neuroinflammation in humans, rats and mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

MHC2TA is associated with differential MHC molecule expression and susceptibility to rheumatoid arthritis, multiple sclerosis and myocardial infarction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Eae19, a new locus on rat chromosome 15 regulating experimental autoimmune encephalomyelitis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

A comparative genetic analysis between collagen-induced arthritis and pristane-induced arthritis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Positional identification of Ncf1 as a gene that regulates arthritis severity in rats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Rats made congenic for Oia3 on chromosome 10 become susceptible to squalene-induced arthritis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Evaluation of in vivo cytokine expression in EAU-susceptible and resistant rats: a role for IL-10 in resistance?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Evidence for common autoimmune disease genes controlling onset, severity, and chronicity based on experimental models for multiple sclerosis and rheumatoid arthritis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

The genetics revolution and the assault on rheumatoid arthritis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Quantitative trait loci disposing for both experimental arthritis and encephalomyelitis in the DA rat; impact on severity of myelin oligodendrocyte glycoprotein-induced experimental autoimmune encephalomyelitis and antibody isotype pattern

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Identification of rat susceptibility loci for adjuvant-oil-induced arthritis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Arthritis induced in rats with adjuvant oil is a genetically restricted, alpha beta T-cell dependent autoimmune disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Characterization of the fawn-hooded rat as a model for hemostatic studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Autoimmunity to type II collagen an experimental model of arthritis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Differing responses of inbred rat strains in experimental autoimmune thyrioditis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

21 June 2018

Genetic control of arthritis onset, severity and chronicity in a model for rheumatoid arthritis in rats.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

DA rats from two colonies differ genetically and in their arthritis susceptibility

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

Identification and isolation of dominant susceptibility loci for pristane-induced arthritis

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

Resolution of a 16.8-Mb autoimmunity-regulating rat chromosome 4 region into multiple encephalomyelitis quantitative trait loci and evidence for epistasis.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

Distribution and functional impact of DNA copy number variation in the rat.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

Paradoxical effects of arthritis-regulating chromosome 4 regions on myelin oligodendrocyte glycoprotein-induced encephalomyelitis in congenic rats.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

Two-loci interaction confirms arthritis-regulating quantitative trait locus on rat chromosome 6.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

Profound and paradoxical impact on arthritis and autoimmunity of the rat antigen-presenting lectin-like receptor complex

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

Comparative susceptibility of DA, LEW, and LEW. 1AV1 rats to arthritis induced with different arthritogens: Mineral oil, mycobacteria, muramyl dipeptide, avridine and rat collagen type II

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

IL-22RA2 Associates with Multiple Sclerosis and Macrophage Effector Mechanisms in Experimental Neuroinflammation

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

RGMA and IL21R show association with experimental inflammation and multiple sclerosis

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

A genome-wide search identifies two susceptibility loci for experimental autoimmune encephalomyelitis on rat chromosomes 4 and 10.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4041999

30 October 2018

Finemapping of the arthritis QTL Pia7 reveals co-localization with Oia2 and the APLEC locus

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-391

21 January 2018

The non-MHC quantitative trait locus Cia5 contains three major arthritis genes that differentially regulate disease severity, pannus formation, and joint damage in collagen- and pristane-induced arthritis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vra4 congenic rats with allelic differences in the class II transactivator gene display altered susceptibility to experimental autoimmune encephalomyelitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chronicity of pristane-induced arthritis in rats is controlled by genes on chromosome 14

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Linkage Analysis of Myelin Oligodendrocyte Glycoprotein-Induced Experimental Autoimmune Encephalomyelitis in the Rat Identifies a Locus Controlling Demyelination on Chromosome 18

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

New Loci Regulating Rat Myelin Oligodendrocyte Glycoprotein-Induced Experimental Autoimmune Encephalomyelitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multiple loci comprising immune-related genes regulate experimental neuroinflammation

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complex genetic control in a rat model for rheumatoid arthritis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An advanced intercross line resolves Eae18 into two narrow quantitative trait loci syntenic to multiple sclerosis candidate loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polygenic control of autoimmune peripheral nerve inflammation in rat

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pristane, a non-antigenic adjuvant, induces MHC class II-restricted, arthritogenic T cells in the rat

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic linkage analysis of the antibody responses to myelin basic protein and myelin oligodendrocyte glycoprotein in rats immunized with rat spinal cord homogenate

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Refinement of the Iddm4 diabetes susceptibility locus reveals TCRVbeta4 as a candidate gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic analysis of inflammation, cytokine mRNA expression and disease course of relapsing experimental autoimmune encephalomyelitis in DA rats

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The homotransplantation of functional erythropoietic elements in the rat following total-body irradiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/24885425

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-15-391

1 reference

Europe PubMed Central

28 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-15-391

9 September 2019

1 reference

Europe PubMed Central

28 July 2017

1 reference

Europe PubMed Central

28 July 2017

ResearchGate publication ID

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