(Q33710165)

28 July 2017

Escherichia coli RNA polymerase terminates transcription efficiently at rho-independent terminators on single-stranded DNA templates (English)

1 reference

28 July 2017

1 reference

S M Uptain

1

1 reference

28 July 2017

M J Chamberlin

series ordinal

2

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28 July 2017

language of work or name

English

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publication date

1 December 1997

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Proceedings of the National Academy of Sciences of the United States of America

28 July 2017

1 reference

28 July 2017

94

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28 July 2017

13548-13553

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28 July 2017

25

1 reference

describes a project that uses

28 July 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC28343/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Basic mechanisms of transcript elongation and its regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Supercoil-induced extrusion of a regulatory DNA hairpin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Control of transcription termination in prokaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Intrinsic termination of T7 RNA polymerase mediated by either RNA or DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Transcription antitermination: the lambda paradigm updated

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Discontinuous mechanism of transcription elongation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Discontinuous movements of DNA and RNA in RNA polymerase accompany formation of a paused transcription complex.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

RNA cleavage and chain elongation by Escherichia coli DNA-dependent RNA polymerase in a binary enzyme.RNA complex.

21 June 2018

1 reference

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A computer algorithm for testing potential prokaryotic terminators

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Exonuclease III of Escherichia coli K-12, an AP endonuclease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

DNA-RNA hybrid duplexes containing oligo(dA:rU) sequences are exceptionally unstable and may facilitate termination of transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Identification and characterization of a new transcriptional termination factor from Escherichia coli

21 June 2018

1 reference

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Terminators of transcription with RNA polymerase from Escherichia coli: what they look like and how to find them.

21 June 2018

1 reference

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A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions

21 June 2018

1 reference

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Sequences linked to prokaryotic promoters can affect the efficiency of downstream termination sites

21 June 2018

1 reference

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Isolation and structural analysis of the Escherichia coli trp leader paused transcription complex.

21 June 2018

1 reference

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Transcript elongation and termination are competitive kinetic processes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

A thermodynamic analysis of RNA transcript elongation and termination in Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Prediction of rho-independent Escherichia coli transcription terminators. A statistical analysis of their RNA stem-loop structures.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Structural analysis of ternary complexes of Escherichia coli RNA polymerase. Individual complexes halted along different transcription units have distinct and unexpected biochemical properties

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Escherichia coli single-stranded DNA-binding protein is a supercoiled template-dependent transcriptional activator of N4 virion RNA polymerase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Parameters affecting transcription termination by Escherichia coli RNA. II. Construction and analysis of hybrid terminators

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Parameters affecting transcription termination by Escherichia coli RNA polymerase. I. Analysis of 13 rho-independent terminators

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

New models for the mechanism of transcription elongation and its regulation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving polymin P precipitation and DNA-cellulose chromatography

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

A simple procedure for resolution of Escherichia coli RNA polymerase holoenzyme from core polymerase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

A quantitative assay for bacterial RNA polymerases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=28343

Transcription termination in Escherichia coli. Measurement of the rate of enzyme release from Rho-independent terminators

21 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13548

nusA protein of Escherichia coli is an efficient transcription termination factor for certain terminator sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13548

[26] Exonuclease III of Escherichia coli K-12, an AP endonuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13548

Coupling between transcription termination and RNA polymerase inchworming.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.94.25.13548

The elongation-termination decision in transcription

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9391063

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

RNA polymerase II ternary complexes may become arrested after transcribing to within 10 bases of the end of linear templates

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9391063

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.94.25.13548

1 reference

28 July 2017

0 references

1 reference

28 July 2017

1 reference