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Accessing DNA damage in chromatin: insights from transcription
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scholarly article
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stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
review article
1 reference
stated in
Europe PubMed Central
title
Accessing DNA damage in chromatin: insights from transcription
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
main subject
DNA damage
0 references
author name string
Meijer M
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
Smerdon MJ
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
language of work or name
English
0 references
publication date
1 July 1999
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
published in
BioEssays
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
volume
21
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
page(s)
596-603
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
issue
7
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
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Components of the human SWI/SNF complex are enriched in active chromatin and are associated with the nuclear matrix.
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Glucocorticoid receptor-glucocorticoid response element binding stimulates nucleosome disruption by the SWI/SNF complex
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RSC, an essential, abundant chromatin-remodeling complex
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Sfh1p, a component of a novel chromatin-remodeling complex, is required for cell cycle progression
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DNA excision repair
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Relationships between DNA repair and transcription
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DNA repair in an active gene: removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall.
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Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene
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Site-specific DNA repair at the nucleosome level in a yeast minichromosome.
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Preferential repair of cyclobutane pyrimidine dimers in the transcribed strand of a gene in yeast chromosomes and plasmids is dependent on transcription
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Preferential repair of DNA damage on the transcribed strand of the human metallothionein genes requires RNA polymerase II.
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Escherichia coli mfd mutant deficient in "mutation frequency decline" lacks strand-specific repair: in vitro complementation with purified coupling factor
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ERCC6, a member of a subfamily of putative helicases, is involved in Cockayne's syndrome and preferential repair of active genes
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The Cockayne syndrome group A gene encodes a WD repeat protein that interacts with CSB protein and a subunit of RNA polymerase II TFIIH
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Molecular cloning and characterization of Saccharomyces cerevisiae RAD28, the yeast homolog of the human Cockayne syndrome A (CSA) gene
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Human transcription-repair coupling factor CSB/ERCC6 is a DNA-stimulated ATPase but is not a helicase and does not disrupt the ternary transcription complex of stalled RNA polymerase II
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21 January 2018
Recruitment of the putative transcription-repair coupling factor CSB/ERCC6 to RNA polymerase II elongation complexes
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RNA polymerase II stalled at a thymine dimer: footprint and effect on excision repair
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Transcript cleavage by RNA polymerase II arrested by a cyclobutane pyrimidine dimer in the DNA template
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Cockayne syndrome: defective repair of transcription?
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Yeast RNA polymerase II transcription in vitro is inhibited in the presence of nucleotide excision repair: complementation of inhibition by Holo-TFIIH and requirement for RAD26.
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Human cyclin-dependent kinase-activating kinase exists in three distinct complexes
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Reaction mechanism of human DNA repair excision nuclease
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Different forms of TFIIH for transcription and DNA repair: holo-TFIIH and a nucleotide excision repairosome
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Nucleotide excision repair in yeast is mediated by sequential assembly of repair factors and not by a pre-assembled repairosome
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Yeast Rad7-Rad16 complex, specific for the nucleotide excision repair of the nontranscribed DNA strand, is an ATP-dependent DNA damage sensor
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Recycling of the general transcription factors during RNA polymerase II transcription
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DNA damage recognition by XPA protein promotes efficient recruitment of transcription factor II H.
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Transitions in the coupling of transcription and nucleotide excision repair within RNA polymerase II-transcribed genes of Saccharomyces cerevisiae
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The transcription-repair coupling factor CSA is required for efficient repair only during the elongation stages of RNA polymerase II transcription
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Formation and processing of UV photoproducts: effects of DNA sequence and chromatin environment
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21 January 2018
Gene specific DNA repair
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Excision repair at the level of the nucleotide in the Saccharomyces cerevisiae MFA2 gene: mapping of where enhanced repair in the transcribed strand begins or ends and identification of only a partial rad16 requisite for repairing upstream control s
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Preferential DNA Repair in Human Cells
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21 January 2018
Chromatin structure modulates DNA repair by photolyase in vivo
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21 January 2018
Nucleosome structure and positioning modulate nucleotide excision repair in the non-transcribed strand of an active gene
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21 January 2018
Site-specific repair of cyclobutane pyrimidine dimers in a positioned nucleosome by photolyase and T4 endonuclease V in vitro
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21 January 2018
UV induced (6-4) photoproducts are distributed differently than cyclobutane dimers in nucleosomes
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Chromatin assembly coupled to DNA repair: a new role for chromatin assembly factor I.
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Initiation and bidirectional propagation of chromatin assembly from a target site for nucleotide excision repair
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The RAD7 and RAD16 genes, which are essential for pyrimidine dimer removal from the silent mating type loci, are also required for repair of the nontranscribed strand of an active gene in Saccharomyces cerevisiae
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Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291521-1878%28199907%2921%3A7%3C596%3A%3AAID-BIES8%3E3.0.CO%3B2-5
retrieved
21 January 2018
Transcription-coupled and global genome repair in the Saccharomyces cerevisiae RPB2 gene at nucleotide resolution
1 reference
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Crossref
reference URL
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retrieved
21 January 2018
The RAD7, RAD16, and RAD23 genes of Saccharomyces cerevisiae: requirement for transcription-independent nucleotide excision repair in vitro and interactions between the gene products
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reference URL
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retrieved
21 January 2018
Assessing the requirements for nucleotide excision repair proteins of Saccharomyces cerevisiae in an in vitro system
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291521-1878%28199907%2921%3A7%3C596%3A%3AAID-BIES8%3E3.0.CO%3B2-5
retrieved
21 January 2018
Interaction of the yeast RAD7 and SIR3 proteins: implications for DNA repair and chromatin structure
1 reference
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reference URL
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retrieved
21 January 2018
Identification of RAD16, a yeast excision repair gene homologous to the recombinational repair gene RAD54 and to the SNF2 gene involved in transcriptional activation
1 reference
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reference URL
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retrieved
21 January 2018
Chromatin
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reference URL
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retrieved
21 January 2018
RNA polymerase II holoenzyme contains SWI/SNF regulators involved in chromatin remodeling
1 reference
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reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291521-1878%28199907%2921%3A7%3C596%3A%3AAID-BIES8%3E3.0.CO%3B2-5
retrieved
21 January 2018
DNA repair within nucleosome cores of UV-irradiated human cells
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291521-1878%28199907%2921%3A7%3C596%3A%3AAID-BIES8%3E3.0.CO%3B2-5
retrieved
21 January 2018
Unfolding of nucleosome cores dramatically changes the distribution of ultraviolet photoproducts in DNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291521-1878%28199907%2921%3A7%3C596%3A%3AAID-BIES8%3E3.0.CO%3B2-5
retrieved
21 January 2018
Distribution within chromatin of deoxyribonucleic acid repair synthesis occurring at different times after ultraviolet radiation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291521-1878%28199907%2921%3A7%3C596%3A%3AAID-BIES8%3E3.0.CO%3B2-5
retrieved
21 January 2018
Identifiers
DOI
10.1002/(SICI)1521-1878(199907)21:7<596::AID-BIES8>3.0.CO;2-5
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
PubMed ID
10472186
1 reference
stated in
Europe PubMed Central
PubMed ID
10472186
retrieved
28 July 2017
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