(Q33762623)

29 July 2017

title

Reproducibility of 3D chromatin configuration reconstructions (English)

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29 July 2017

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Mark R Segal

1

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29 July 2017

Hao Xiong

2

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29 July 2017

Daniel Capurso

3

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29 July 2017

Mariel Vazquez

4

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29 July 2017

Javier Arsuaga

5

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29 July 2017

publication date

11 February 2014

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29 July 2017

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29 July 2017

volume

15

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29 July 2017

issue

3

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29 July 2017

page(s)

442-456

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Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

29 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

A distance-based test of association between paired heterogeneous genomic data.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Handling realistic assumptions in hypothesis testing of 3D co-localization of genomic elements

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Bayesian inference of spatial organizations of chromosomes

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Physical tethering and volume exclusion determine higher-order genome organization in budding yeast

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Topological domains in mammalian genomes identified by analysis of chromatin interactions

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

On the assessment of statistical significance of three-dimensional colocalization of sets of genomic elements

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Three-dimensional modeling of chromatin structure from interaction frequency data using Markov chain Monte Carlo sampling

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Nuclear colocalization of transcription factor target genes strengthens coregulation in yeast

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Bridging the resolution gap in structural modeling of 3D genome organization

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

The performance of the Congruence Among Distance Matrices (CADM) test in phylogenetic analysis

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Genomics tools for unraveling chromosome architecture

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

A three-dimensional model of the yeast genome

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

The impact of translocations and gene fusions on cancer causation

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

Beyond the sequence: cellular organization of genome function

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

A random-walk/giant-loop model for interphase chromosomes

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

The detection of disease clustering and a generalized regression approach

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4059464

The three 'C' s of chromosome conformation capture: controls, controls, controls.

22 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOSTATISTICS%2FKXU003

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOSTATISTICS%2FKXU003

Pivotal Bootstrap Methods fork-Sample Problems in Directional Statistics and Shape Analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOSTATISTICS%2FKXU003

ASSESSING CONGRUENCEAMONG DISTANCE MATRICES: SINGLE-MALT SCOTCH WHISKIES REVISITED

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOSTATISTICS%2FKXU003

10.1093/BIOSTATISTICS/KXU003

21 January 2018

Identifiers

DOI

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29 July 2017

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29 July 2017

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