(Q33769266)

29 July 2017

title

Competing upstream 5' splice sites enhance the rate of proximal splicing (English)

1 reference

29 July 2017

Martin J Hicks

1

1 reference

29 July 2017

William F Mueller

series ordinal

2

1 reference

29 July 2017

Peter J Shepard

series ordinal

3

1 reference

29 July 2017

Klemens J Hertel

series ordinal

4

1 reference

29 July 2017

language of work or name

English

0 references

publication date

1 February 2010

1 reference

Molecular and Cellular Biology

29 July 2017

published in

1 reference

29 July 2017

volume

30

1 reference

29 July 2017

issue

8

1 reference

29 July 2017

page(s)

1878-1886

1 reference

Splice-site pairing is an intrinsically high fidelity process.

29 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Alternative isoform regulation in human tissue transcriptomes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Conserved RNA secondary structures promote alternative splicing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Splicing regulation: from a parts list of regulatory elements to an integrated splicing code

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Features of 5'-splice-site efficiency derived from disease-causing mutations and comparative genomics

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Combinatorial control of exon recognition.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Pre-mRNA secondary structures influence exon recognition.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

A complex signaling pathway regulates SRp38 phosphorylation and pre-mRNA splicing in response to heat shock

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

SR protein-mediated inhibition of CFTR exon 9 inclusion: molecular characterization of the intronic splicing silencer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

The ASAP II database: analysis and comparative genomics of alternative splicing in 15 animal species

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Comparative analysis identifies exonic splicing regulatory sequences--The complex definition of enhancers and silencers

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

HOLLYWOOD: a comparative relational database of alternative splicing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

The architecture of pre-mRNAs affects mechanisms of splice-site pairing.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Promoter usage and alternative splicing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Determinants of the inherent strength of human 5' splice sites

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Serine/arginine-rich protein-dependent suppression of exon skipping by exonic splicing enhancers

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Finishing the euchromatic sequence of the human genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

ASD: the Alternative Splicing Database.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Direct repression of splicing by transformer-2.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Mfold web server for nucleic acid folding and hybridization prediction

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Mechanisms of alternative pre-messenger RNA splicing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

The U1 snRNP protein U1C recognizes the 5' splice site in the absence of base pairing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Modulation of survival motor neuron pre-mRNA splicing by inhibition of alternative 3' splice site pairing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Inhibition by SR proteins of splicing of a regulated adenovirus pre-mRNA.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Finding splice sites within a wilderness of RNA

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Analyzing mechanisms of alternative pre-mRNA splicing using in vitro splicing assays.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

Ser/Arg-rich protein-mediated communication between U1 and U2 small nuclear ribonucleoprotein particles

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849477

A role for exon sequences and splice-site proximity in splice-site selection

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20123971

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Control of Alternative Splicing by the Differential Binding of U1 Small Nuclear Ribonucleoprotein Particle

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20123971

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A two-step mechanism for 5' and 3' splice-site pairing

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20123971

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MCB.01071-09

1 reference

29 July 2017

1 reference

29 July 2017

1 reference