(Q33770350)

English

Dynamical remodeling of the transcriptome during short-term anaerobiosis in Saccharomyces cerevisiae: differential response and role of Msn2 and/or Msn4 and other factors in galactose and glucose media

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scholarly article

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Europe PubMed Central

29 July 2017

Dynamical remodeling of the transcriptome during short-term anaerobiosis in Saccharomyces cerevisiae: differential response and role of Msn2 and/or Msn4 and other factors in galactose and glucose media (English)

1 reference

Europe PubMed Central

29 July 2017

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Saccharomyces cerevisiae

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inferred from title

author name string

Liang-Chuan Lai

1

1 reference

Europe PubMed Central

29 July 2017

Alexander L Kosorukoff

2

1 reference

Europe PubMed Central

29 July 2017

Patricia V Burke

3

1 reference

Europe PubMed Central

29 July 2017

Kurt E Kwast

4

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Europe PubMed Central

29 July 2017

language of work or name

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publication date

1 May 2005

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Europe PubMed Central

29 July 2017

Molecular and Cellular Biology

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Europe PubMed Central

29 July 2017

25

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Europe PubMed Central

29 July 2017

10

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Europe PubMed Central

29 July 2017

4075-4091

1 reference

Europe PubMed Central

29 July 2017

CYGD: the Comprehensive Yeast Genome Database

1 reference

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A dynamic transcriptional network communicates growth potential to ribosome synthesis and critical cell size

1 reference

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Sfp1 is a stress- and nutrient-sensitive regulator of ribosomal protein gene expression

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Metalloregulation of yeast membrane steroid receptor homologs.

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Sfp1 plays a key role in yeast ribosome biogenesis

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Oscillatory nucleocytoplasmic shuttling of the general stress response transcriptional activators Msn2 and Msn4 in Saccharomyces cerevisiae

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Transcriptional regulatory networks in Saccharomyces cerevisiae

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Coordinate regulation of sugar flux and translation by PAS kinase

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Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae.

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4 July 2018

Convergence of the target of rapamycin and the Snf1 protein kinase pathways in the regulation of the subcellular localization of Msn2, a transcriptional activator of STRE (Stress Response Element)-regulated genes

1 reference

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Systematic identification of pathways that couple cell growth and division in yeast

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Transcriptional profiling identifies two members of the ATP-binding cassette transporter superfamily required for sterol uptake in yeast

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ChIP-chip: a genomic approach for identifying transcription factor binding sites

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A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

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4 July 2018

Regulation of Saccharomyces cerevisiae FET4 by oxygen and iron

1 reference

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4 July 2018

Multiple regulatory roles of a novel Saccharomyces cerevisiae protein, encoded by YOL002c, in lipid and phosphate metabolism

1 reference

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Genomic analyses of anaerobically induced genes in Saccharomyces cerevisiae: functional roles of Rox1 and other factors in mediating the anoxic response.

1 reference

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1 reference

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Ubiquinone biosynthesis in microorganisms

1 reference

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Upc2p and Ecm22p, dual regulators of sterol biosynthesis in Saccharomyces cerevisiae

1 reference

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Aligning gene expression time series with time warping algorithms

1 reference

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Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

1 reference

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Remodeling of yeast genome expression in response to environmental changes

1 reference

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4 July 2018

Induction and repression of DAN1 and the family of anaerobic mannoprotein genes in Saccharomyces cerevisiae occurs through a complex array of regulatory sites

1 reference

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4 July 2018

Reserve carbohydrates metabolism in the yeast Saccharomyces cerevisiae

1 reference

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4 July 2018

Genomic expression programs in the response of yeast cells to environmental changes

1 reference

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1 reference

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4 July 2018

Functional discovery via a compendium of expression profiles

1 reference

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4 July 2018

The transcriptional response of Saccharomyces cerevisiae to osmotic shock. Hot1p and Msn2p/Msn4p are required for the induction of subsets of high osmolarity glycerol pathway-dependent genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae

1 reference

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4 July 2018

Induction of neutral trehalase Nth1 by heat and osmotic stress is controlled by STRE elements and Msn2/Msn4 transcription factors: variations of PKA effect during stress and growth

1 reference

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4 July 2018

The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors

1 reference

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4 July 2018

Genome-wide transcriptional analysis of aerobic and anaerobic chemostat cultures of Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

Identification and characterization of major lipid particle proteins of the yeast Saccharomyces cerevisiae

1 reference

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1 reference

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4 July 2018

The protein kinase C-mediated MAP kinase pathway involved in the maintenance of cellular integrity in Saccharomyces cerevisiae.

1 reference

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4 July 2018

Nim1-related kinases coordinate cell cycle progression with the organization of the peripheral cytoskeleton in yeast.

1 reference

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4 July 2018

Structure of HAP1-18-DNA implicates direct allosteric effect of protein-DNA interactions on transcriptional activation

1 reference

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4 July 2018

The anatomy of a hypoxic operator in Saccharomyces cerevisiae.

1 reference

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4 July 2018

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1 reference

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4 July 2018

Oxygen sensing and the transcriptional regulation of oxygen-responsive genes in yeast

1 reference

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4 July 2018

The transcriptional regulator Hap1p (Cyp1p) is essential for anaerobic or heme-deficient growth of Saccharomyces cerevisiae: Genetic and molecular characterization of an extragenic suppressor that encodes a WD repeat protein

1 reference

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4 July 2018

A fermentor system for regulating oxygen at low concentrations in cultures of Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

Nuclear localization of the C2H2 zinc finger protein Msn2p is regulated by stress and protein kinase A activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

Mitochondrial ribosomal proteins (MRPs) of yeast.

1 reference

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4 July 2018

Exploring the metabolic and genetic control of gene expression on a genomic scale

1 reference

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4 July 2018

NMR analysis of CYP1(HAP1) DNA binding domain-CYC1 upstream activation sequence interactions: recognition of a CGG trinucleotide and of an additional thymine 5 bp downstream by the zinc cluster and the N-terminal extremity of the protein

1 reference

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4 July 2018

Effects of various types of stress on the metabolism of reserve carbohydrates in Saccharomyces cerevisiae: genetic evidence for a stress-induced recycling of glycogen and trehalose.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

Thioredoxin reductase-dependent inhibition of MCB cell cycle box activity in Saccharomyces cerevisiae

1 reference

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4 July 2018

Review: compilation and characteristics of dedicated transcription factors in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

Msn2p, a zinc finger DNA-binding protein, is the transcriptional activator of the multistress response in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

The Saccharomyces cerevisiae zinc finger proteins Msn2p and Msn4p are required for transcriptional induction through the stress response element (STRE)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

Two homologous zinc finger genes identified by multicopy suppression in a SNF1 protein kinase mutant of Saccharomyces cerevisiae

1 reference

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4 July 2018

Trehalose synthase: guard to the gate of glycolysis in yeast?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

The protein kinase C-activated MAP kinase pathway of Saccharomyces cerevisiae mediates a novel aspect of the heat shock response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

Mutants in the S. cerevisiae PKC1 gene display a cell cycle-specific osmotic stability defect

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

HAP1 and ROX1 form a regulatory pathway in the repression of HEM13 transcription in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

Regulation of gene expression by oxygen in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1087712

4 July 2018

A rapid filtration apparatus for harvesting cells under controlled conditions for use in genome-wide temporal profiling studies.

1 reference

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30 October 2018

A mechanism of oxygen sensing in yeast. Multiple oxygen-responsive steps in the heme biosynthetic pathway affect Hap1 activity

1 reference

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30 October 2018

Non-respiratory oxygen consumption pathways in anaerobically-grown Saccharomyces cerevisiae: evidence and partial characterization

1 reference

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30 October 2018

The yeast transcriptome in aerobic and hypoxic conditions: effects of hap1, rox1, rox3 and srb10 deletions.

1 reference

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30 October 2018

Global gene expression during short-term ethanol stress in Saccharomyces cerevisiae

1 reference

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30 October 2018

Nutrient-induced signal transduction through the protein kinase A pathway and its role in the control of metabolism, stress resistance, and growth in yeast.

1 reference

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30 October 2018

SCPD: a promoter database of the yeast Saccharomyces cerevisiae.

1 reference

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30 October 2018

Dynamic responses of reserve carbohydrate metabolism under carbon and nitrogen limitations in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A web site for the computational analysis of yeast regulatory sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein kinase C enables the regulatory circuit that connects membrane synthesis to ribosome synthesis in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Anaerobic nutrition of Saccharomyces cerevisiae. II. Unsaturated fatty acid requirement for growth in a defined medium

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In vivo studies of pyridine nucleotide metabolism in Escherichia coli and Saccharomyces cerevisiae by carbon-13 NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A search in the genome of Saccharomyces cerevisiae for genes regulated via stress response elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactions between glucose metabolism and oxidative phosphorylations on respiratory-competent Saccharomyces cerevisiae cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Control of glucose influx into glycolysis and pleiotropic effects studied in different isogenic sets of Saccharomyces cerevisiae mutants in trehalose biosynthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide pools of growing, synchronized and stressed cultures of Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[On the regulation of nicotinic acid biosynthesis in Saccharomyces cerevisiae]

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sterol metabolism and ERG2 gene regulation in the yeast Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hyperphosphorylation of Msn2p and Msn4p in response to heat shock and the diauxic shift is inhibited by cAMP in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/15870279

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.25.10.4075-4091.2005

1 reference

Europe PubMed Central

29 July 2017

PMC publication ID

1 reference

Europe PubMed Central

29 July 2017

1 reference

Europe PubMed Central

29 July 2017

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