(Q33824180)

English

Single nucleotide polymorphisms unravel hierarchical divergence and signatures of selection among Alaskan sockeye salmon (Oncorhynchus nerka) populations

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Single nucleotide polymorphisms unravel hierarchical divergence and signatures of selection among Alaskan sockeye salmon (Oncorhynchus nerka) populations (English)

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

0 references

single-nucleotide polymorphism

1 reference

based on heuristic

inferred from title

ecological hierarchy

1 reference

based on heuristic

inferred from title

author name string

Daniel Gomez-Uchida

1

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

James E Seeb

2

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Matt J Smith

3

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Christopher Habicht

4

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Thomas P Quinn

5

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Lisa W Seeb

6

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

publication date

18 February 2011

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

BMC Evolutionary Biology

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

11

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

48

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2148-11-48

0 references

Small-scale biocomplexity in coastal Atlantic cod supporting a Darwinian perspective on fisheries management.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Recurrent evolution of life history ecotypes in sockeye salmon: implications for conservation and future evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Evolutionary history of Pacific salmon in dynamic environments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

1 reference

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28 July 2018

genepop'007: a complete re-implementation of the genepop software for Windows and Linux

1 reference

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28 July 2018

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

1 reference

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Population diversity and the portfolio effect in an exploited species

1 reference

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The geographic scale of diversification on islands: genetic and morphological divergence at a very small spatial scale in the Mascarene grey white-eye (Aves: Zosterops borbonicus)

1 reference

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Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua).

1 reference

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28 July 2018

Detecting loci under selection in a hierarchically structured population

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Divergence with gene flow and fine-scale phylogeographical structure in the wedge-billed woodcreeper, Glyphorynchus spirurus, a Neotropical rainforest bird.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

MHC standing genetic variation and pathogen resistance in wild Atlantic salmon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Divergent selection and heterogeneous genomic divergence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Clinal variation in MHC diversity with temperature: evidence for the role of host-pathogen interaction on local adaptation in Atlantic salmon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Gene flow, effective population size and selection at major histocompatibility complex genes: brown trout in the Hardanger Fjord, Norway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Use of sequence data from rainbow trout and Atlantic salmon for SNP detection in Pacific salmon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Population structure attributable to reproductive time: isolation by time and adaptation by time

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Using genome scans of DNA polymorphism to infer adaptive population divergence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

MHC studies in nonmodel vertebrates: what have we learned about natural selection in 15 years?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Biocomplexity and fisheries sustainability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Adaptive evolutionary conservation: towards a unified concept for defining conservation units

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Population genetic structure of two ecologically distinct Amazonian spiny rats: separating history and current ecology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Homing in Pacific salmon: mechanisms and ecological basis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Genetic variation of major histocompatibility complex and microsatellite loci: a comparison in bighorn sheep

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

TreeView: an application to display phylogenetic trees on personal computers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Sequence analysis of a polymorphic Mhc class II gene in Pacific salmon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

28 July 2018

Life-history divergence in Chinook salmon: historic contingency and parallel evolution

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Landscape genetics and hierarchical genetic structure in Atlantic salmon: the interaction of gene flow and local adaptation.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Hierarchical components of genetic variation at a species boundary: population structure in two sympatric varieties of Lupinus microcarpus (Leguminosae).

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Transcriptome sequencing and high-resolution melt analysis advance single nucleotide polymorphism discovery in duplicated salmonids

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Large allele frequency differences between human continental groups are more likely to have occurred by drift during range expansions than by selection.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Founding events influence genetic population structure of sockeye salmon (Oncorhynchus nerka) in Lake Clark, Alaska

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Isolation by Distance in Equilibrium and Non-Equilibrium Populations

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Phylogenetic analysis. Models and estimation procedures

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

How well do evolutionary trees describe genetic relationships among populations?

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

EVOLUTION OF TEMPORAL ISOLATION IN THE WILD: GENETIC DIVERGENCE IN TIMING OF MIGRATION AND BREEDING BY INTRODUCED CHINOOK SALMON POPULATIONS

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

The Influence of Life History Trade-Offs and the Size of Incubation Gravels on Egg Size Variation in Sockeye Salmon (Oncorhynchus nerka)

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Comparative analysis of population structure across environments and geographical scales at major histocompatibility complex and microsatellite loci in Atlantic salmon (Salmo salar).

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Genetic diversity and differentiation at MHC genes in island populations of tuatara (Sphenodon spp.).

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

genalex 6: genetic analysis in Excel. Population genetic software for teaching and research

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Biocomplexity in a highly migratory pelagic marine fish, Atlantic herring

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Differential gene exchange between parapatric morphs of Littorina saxatilis detected using AFLP markers

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

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1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

MHC, mate choice and heterozygote advantage in a wild social primate.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

29 October 2018

SNP genotyping by the 5'-nuclease reaction: advances in high-throughput genotyping with nonmodel organisms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

29 October 2018

Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3049142

29 October 2018

Expressed Sequence Tag-Linked Microsatellites as a Source of Gene-Associated Polymorphisms for Detecting Signatures of Divergent Selection in Atlantic Salmon (Salmo salar L.)

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

SNPs in ecology, evolution and conservation

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

The power and promise of population genomics: from genotyping to genome typing

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-48

21 January 2018

Evolution of introns and exons of class II major histocompatibility complex genes of vertebrates

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Geographic heterogeneity in natural selection on an MHC locus in sockeye salmon

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inter- and intralocus recombination drive MHC class IIB gene diversification in a teleost, the three-spined stickleback Gasterosteus aculeatus

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

BALANCING SELECTION, RANDOM GENETIC DRIFT, AND GENETIC VARIATION AT THE MAJOR HISTOCOMPATIBILITY COMPLEX IN TWO WILD POPULATIONS OF GUPPIES (POECILIA RETICULATA)

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fine-scale differentiation between sockeye salmon ecotypes and the effect of phenotype on straying

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Major histocompatibility complex heterozygote advantage and widespread bacterial infections in populations of Chinook salmon (Oncorhynchus tshawytscha)

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single-nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PHYLOGENETIC ANALYSIS: MODELS AND ESTIMATION PROCEDURES

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ISOLATION BY DISTANCE IN EQUILIBRIUM AND NON-EQUILIBRIUM POPULATIONS.

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ANALYZING TABLES OF STATISTICAL TESTS

1 reference

https://pubmed.ncbi.nlm.nih.gov/21332997

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2148-11-48

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2148-11-48

9 September 2019

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

ResearchGate publication ID

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