(Q33830167)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

title

Discovery of barley miRNAs through deep sequencing of short reads (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

Peter Langridge

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

author name string

Bu-Jun Shi

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

Chun-Yuan Huang

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

Ute Baumann

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

language of work or name

English

0 references

publication date

25 February 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

volume

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

page(s)

129

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-129

23 January 2020

exact match

0 references

cites work

A computational-based update on microRNAs and their targets in barley (Hordeum vulgare L.).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Control of cell proliferation in Arabidopsis thaliana by microRNA miR396.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Uncovering small RNA-mediated responses to phosphate deficiency in Arabidopsis by deep sequencing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Conserved miRNA analysis in Gossypium hirsutum through small RNA sequencing.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Conserved microRNAs and their targets in model grass species Brachypodium distachyon

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

SHRiMP: accurate mapping of short color-space reads

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Biotic and abiotic stress down-regulate miR398 expression in Arabidopsis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Characterization and expression profiles of miRNAs in rice seeds

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Data mining for miRNAs and their targets in the Triticeae

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Widespread translational inhibition by plant miRNAs and siRNAs

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs).

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Identification of novel and candidate miRNAs in rice by high throughput sequencing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Conservation and divergence of microRNAs in Populus

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Intragenomic matching reveals a huge potential for miRNA-mediated regulation in plants

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Large-scale identification of microRNAs from a basal eudicot (Eschscholzia californica) and conservation in flowering plants

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Cloning and characterization of microRNAs from wheat (Triticum aestivum L.).

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

CSRDB: a small RNA integrated database and browser resource for cereals

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

A two-hit trigger for siRNA biogenesis in plants

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Identification of small non-coding RNAs from mitochondria and chloroplasts

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Posttranscriptional induction of two Cu/Zn superoxide dismutase genes in Arabidopsis is mediated by downregulation of miR398 and important for oxidative stress tolerance

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

MicroRNAS and their regulatory roles in plants

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Computational evidence for hundreds of non-conserved plant microRNAs

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Elucidation of the small RNA component of the transcriptome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

miRU: an automated plant miRNA target prediction server

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Cloning and characterization of microRNAs from rice

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Computational prediction of miRNAs in Arabidopsis thaliana

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Detection of 91 potential conserved plant microRNAs in Arabidopsis thaliana and Oryza sativa identifies important target genes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Computational identification of plant microRNAs and their targets, including a stress-induced miRNA

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

MicroRNAs: genomics, biogenesis, mechanism, and function

4 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

4 July 2018

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Prediction of plant microRNA targets

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3060140

Deciphering the diversity of small RNAs in plants: the long and short of it.

4 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Biochemical evidence for translational repression by Arabidopsis microRNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Conservation and divergence of plant microRNA genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

The international barley sequencing consortium--at the threshold of efficient access to the barley genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Gene content and virtual gene order of barley chromosome 1H.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Criteria for annotation of plant MicroRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Characterization of 43 non-protein-coding mRNA genes in Arabidopsis, including the MIR162a-derived transcripts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

The GIGANTEA-regulated microRNA172 mediates photoperiodic flowering independent of CONSTANS in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Identification and characterization of new plant microRNAs using EST analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Comprehensive analysis of microRNA expression patterns in renal biopsies of lupus nephritis patients.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Isolation and characterization of wheat-rye recombinants involving chromosome arm 1DS of wheat.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Evolutionary History of the Grasses

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-129

Antisense transcript and RNA processing alterations suppress instability of polyadenylated mRNA in chlamydomonas chloroplasts

21 January 2018

1 reference

12 December 2020

Molecular evolution of the rice miR395 gene family

1 reference

12 December 2020

Bioinformatic identification and expression analysis of new microRNAs from Medicago truncatula

1 reference

12 December 2020

A study of the role of root morphological traits in growth of barley in zinc-deficient soil

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-12-129

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

23 January 2020

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-129

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21352554%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

1 reference