(Q33898439)

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Genome-wide analysis of the CCCH zinc finger family identifies tissue specific and stress responsive candidates in chickpea (Cicer arietinum L.).

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scholarly article

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Europe PubMed Central

29 July 2017

Genome-wide analysis of the CCCH zinc finger family identifies tissue specific and stress responsive candidates in chickpea (Cicer arietinum L.). (English)

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Europe PubMed Central

29 July 2017

Cicer arietinum

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Sabhyata Bhatia

4

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4 June 2020

author name string

Seema Pradhan

1

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4 June 2020

Chandra Kant

2

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4 June 2020

Subodh Verma

3

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4 June 2020

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12 July 2017

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29 July 2017

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4 June 2020

12

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4 June 2020

7

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4 June 2020

e0180469

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4 June 2020

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Creative Commons Attribution 4.0 International

12 July 2017

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April 2022 Public Data File from Crossref

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Global transcriptome analysis of developing chickpea (Cicer arietinum L.) seeds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Tandem CCCH zinc finger proteins in plant growth, development and stress response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

CCCH-type zinc finger family in maize: genome-wide identification, classification and expression profiling under abscisic acid and drought treatments

1 reference

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5 July 2018

Gene discovery and tissue-specific transcriptome analysis in chickpea with massively parallel pyrosequencing and web resource development.

1 reference

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5 July 2018

The Arabidopsis tandem zinc finger protein AtTZF1 affects ABA- and GA-mediated growth, stress and gene expression responses

1 reference

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5 July 2018

Deciphering the role of RNA-binding proteins in the post-transcriptional control of gene expression

1 reference

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Circos: an information aesthetic for comparative genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

The Sequence Alignment/Map format and SAMtools

1 reference

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5 July 2018

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

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5 July 2018

GhZFP1, a novel CCCH-type zinc finger protein from cotton, enhances salt stress tolerance and fungal disease resistance in transgenic tobacco by interacting with GZIRD21A and GZIPR5.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

A conserved CCCH-type zinc finger protein regulates mRNA nuclear adenylation and export

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Mapping and quantifying mammalian transcriptomes by RNA-Seq

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

RNA recognition motifs: boring? Not quite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Structure and function of KH domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Yeast one-hybrid screening for DNA-protein interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Combined networks regulating seed maturation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

TM4 microarray software suite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Molecular recognition of histone H3 by the WD40 protein WDR5.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Application of phylogenetic networks in evolutionary studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Comparison of theoretical proteomes: identification of COGs with conserved and variable pI within the multimodal pI distribution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Multiple modes of RNA recognition by zinc finger proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Segmental duplications and copy-number variation in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

The evolutionary dynamics of plant duplicate genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Interaction of PvALF and VP1 B3 domains with the beta -phaseolin promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Estimating genome conservation between crop and model legume species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

The WD-repeat protein superfamily in Arabidopsis: conservation and divergence in structure and function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Antiquity and evolution of the MADS-box gene family controlling flower development in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Two RNA binding proteins, HEN4 and HUA1, act in the processing of AGAMOUS pre-mRNA in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Tristetraprolin and other CCCH tandem zinc-finger proteins in the regulation of mRNA turnover

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

https://pubmed.ncbi.nlm.nih.gov/28704400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of retroviral RNA production by ZAP, a CCCH-type zinc finger protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Selection and gene duplication: a view from the genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Directed evolution of proteins by exon shuffling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

The evolutionary fate and consequences of duplicate genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Interactions of CCCH zinc finger proteins with mRNA. Binding of tristetraprolin-related zinc finger proteins to Au-rich elements and destabilization of mRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Detecting protein function and protein-protein interactions from genome sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Evidence that tristetraprolin binds to AU-rich elements and promotes the deadenylation and destabilization of tumor necrosis factor alpha mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Adaptation of protein surfaces to subcellular location

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Cleavage of RNA hairpins mediated by a developmentally regulated CCCH zinc finger protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Cell cycle control of the yeast HO gene: cis- and trans-acting regulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5507508

5 July 2018

HUA1, a regulator of stamen and carpel identities in Arabidopsis, codes for a nuclear RNA binding protein.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

A novel nuclear-localized CCCH-type zinc finger protein, OsDOS, is involved in delaying leaf senescence in rice.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

Zinc-finger transcription factors in plants.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

The CCCH-type zinc finger proteins AtSZF1 and AtSZF2 regulate salt stress responses in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

Genome-wide analysis of the CCCH zinc finger gene family in Medicago truncatula

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.).

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

SOMNUS, a CCCH-type zinc finger protein in Arabidopsis, negatively regulates light-dependent seed germination downstream of PIL5.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

The Arabidopsis tandem CCCH zinc finger proteins AtTZF4, 5 and 6 are involved in light-, abscisic acid- and gibberellic acid-mediated regulation of seed germination

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

Synteny and Collinearity in Plant Genomes

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

The nonsynonymous/synonymous substitution rate ratio versus the radical/conservative replacement rate ratio in the evolution of mammalian genes.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

The Arabidopsis tandem zinc finger protein AtTZF1 traffics between the nucleus and cytoplasmic foci and binds both DNA and RNA.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

Regulation and function of the Arabidopsis ABA-insensitive4 gene in seed and abscisic acid response signaling networks

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0180469

21 January 2018

Rapid evolution of goat and sheep globin genes following gene duplication

1 reference

https://pubmed.ncbi.nlm.nih.gov/28704400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PEI1, an embryo-specific zinc finger protein gene required for heart-stage embryo formation in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/28704400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic maps and the use of synteny

1 reference

https://pubmed.ncbi.nlm.nih.gov/28704400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The galvanization of biology: a growing appreciation for the roles of zinc

1 reference

https://pubmed.ncbi.nlm.nih.gov/28704400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0180469

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28704400%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

2017PLoSO..1280469P

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1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28704400%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28704400%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

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