(Q33936911)

30 July 2017

Rates of intron loss and gain: implications for early eukaryotic evolution (English)

1 reference

30 July 2017

Scott William Roy

1

1 reference

PubMed ID

15827119

30 July 2017

Walter Gilbert

series ordinal

2

1 reference

PubMed ID

15827119

30 July 2017

language of work or name

English

0 references

publication date

12 April 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

1 reference

30 July 2017

102

1 reference

30 July 2017

16

1 reference

30 July 2017

5773-5778

1 reference

Principles of protein and lipid targeting in secondary symbiogenesis: euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree

30 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

The pattern of intron loss

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Patterns of intron gain and loss in fungi

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Preferential loss and gain of introns in 3' portions of genes suggests a reverse-transcription mechanism of intron insertion

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Worm genomes hold the smoking guns of intron gain

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Prevalence of intron gain over intron loss in the evolution of paralogous gene families

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Origins of recently gained introns in Caenorhabditis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

A phylogeny of caenorhabditis reveals frequent loss of introns during nematode evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Evidence of splice signal migration from exon to intron during intron evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Spliceosomal Introns: New Insights into their Evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

5 July 2018

Mystery of intron gain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Remarkable interkingdom conservation of intron positions and massive, lineage-specific intron loss and gain in eukaryotic evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

The emergence of a synthetic theory of intron evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Large-scale comparison of intron positions in mammalian genes shows intron loss but no gain

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

5 July 2018

Eukaryotic intron loss

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

A new Drosophila spliceosomal intron position is common in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Molecular evolution of eukaryotic genomes: hemiascomycetous yeast spliceosomal introns

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

On biased distribution of introns in various eukaryotes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Intron gain and loss in the evolution of the conserved eukaryotic recombination machinery.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Sequence of Plasmodium falciparum chromosomes 2, 10, 11 and 14

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Intron evolution as a population-genetic process

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

A kingdom-level phylogeny of eukaryotes based on combined protein data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Intron sliding in conserved gene families.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

No footprints of primordial introns in a eukaryotic genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Intron-exon organization and phylogeny in a large superfamily, the paralogous cytochrome P450 genes of Arabidopsis thaliana.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Genome evolution and the evolution of exon-shuffling--a review

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Late changes in spliceosomal introns define clades in vertebrate evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

On the possibility of constructive neutral evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

The recent origins of spliceosomal introns revisited

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

U2 and U6 snRNA genes in the microsporidian Nosema locustae: evidence for a functional spliceosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Intron loss and gain during evolution of the catalase gene family in angiosperms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Two large families of chemoreceptor genes in the nematodes Caenorhabditis elegans and Caenorhabditis briggsae reveal extensive gene duplication, diversification, movement, and intron loss

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Toward a resolution of the introns early/late debate: only phase zero introns are correlated with the structure of ancient proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

A variable intron distribution in globin genes of Chironomus: evidence for recent intron gain

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Relationship between "proto-splice sites" and intron phases: evidence from dicodon analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Intron "sliding" and the diversity of intron positions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Towards a reconciliation of the introns early or late views: triosephosphate isomerase genes from insects

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Quality not quantity: the pufferfish genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

A novel intron site in the triosephosphate isomerase gene from the mosquito Culex tarsalis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Seven newly discovered intron positions in the triose-phosphate isomerase gene: evidence for the introns-late theory

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Evidence against the exon theory of genes derived from the triose-phosphate isomerase gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Selfish DNA and the origin of introns

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Intron/exon structure of the chicken pyruvate kinase gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Evidence that introns arose at proto-splice sites.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

How were introns inserted into nuclear genes?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Intron phylogeny: a new hypothesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

The recent origins of introns

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Analysis of nonuniformity in intron phase distribution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Intron evolution: a statistical comparison of two models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Split Genes and RNA Splicing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

The evolution of genes: the chicken preproinsulin gene.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Intron distribution in ancient paralogs supports random insertion and not random loss

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Ancient and recent intron stability in the Artemia hemoglobin gene.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Footprints of primordial introns on the eukaryotic genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Dynamic insertion-deletion of introns in deuterostome EF-1alpha genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

The evolutionary gain of spliceosomal introns: sequence and phase preferences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Evidence that human genes of modular proteins have retained significantly more ancestral introns than their fly or worm orthologues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Large-scale analysis of gene structure in rhodopsin-like GPCRs: evidence for widespread loss of an ancient intron

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Trichomonas vaginalis possesses a gene encoding the essential spliceosomal component, PRP8.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Conservation, regulation, synteny, and introns in a large-scale C. briggsae-C. elegans genomic alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Accelerated rates of intron gain/loss and protein evolution in duplicate genes in human and mouse malaria parasites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0500383102

Exon junction sequences as cryptic splice sites: implications for intron origin.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556292

Footprints of primordial introns on the eukaryotic genome: still no clear traces

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15827119

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Divergent structures of Caenorhabditis elegans cytochrome P450 genes suggest the frequent loss and gain of introns during the evolution of nematodes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15827119

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The exon theory of genes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15827119

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0500383102

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference

PubMed ID

15827119