(Q33940038)

30 July 2017

title

Thymine dimer-induced structural changes to the DNA duplex examined with reactive probes (†). (English)

1 reference

30 July 2017

Amy E Rumora

1

1 reference

30 July 2017

Katarzyna M Kolodziejczak

series ordinal

2

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30 July 2017

Anne Malhowski Wagner

series ordinal

3

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30 July 2017

Megan E Núñez

series ordinal

4

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30 July 2017

language of work or name

English

0 references

publication date

1 December 2008

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30 July 2017

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30 July 2017

volume

47

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30 July 2017

issue

49

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30 July 2017

page(s)

13026-13035

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describes a project that uses

30 July 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2891882/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Insights into finding a mismatch through the structure of a mispaired DNA bound by a rhodium intercalator

5 July 2018

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Recognition and repair of the cyclobutane thymine dimer, a major cause of skin cancers, by the human excision nuclease

5 July 2018

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Crystal structure of a DNA decamer containing a cis-syn thymine dimer

5 July 2018

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Site-selective reactions of imperfectly matched DNA with small chemical molecules: applications in mutation detection

5 July 2018

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A multistep damage recognition mechanism for global genomic nucleotide excision repair

5 July 2018

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Recognition of base mismatches in DNA by 5,6-chrysenequinone diimine complexes of rhodium(III): a proposed mechanism for preferential binding in destabilized regions of the double helix

5 July 2018

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The many faces of DNA polymerases: strategies for mutagenesis and for mutational avoidance

5 July 2018

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Quality control by DNA repair

5 July 2018

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A versatile mismatch recognition agent: specific cleavage of a plasmid DNA at a single base mispair

5 July 2018

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Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase, Poleta

5 July 2018

1 reference

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Solution-state structure of a DNA dodecamer duplex containing a Cis-syn thymine cyclobutane dimer, the major UV photoproduct of DNA

5 July 2018

1 reference

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Detection of thymine [2+2] photodimer repair in DNA: selective reaction of KMnO4

5 July 2018

1 reference

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Oxidative charge transfer To repair thymine dimers and damage guanine bases in DNA assemblies containing tethered metallointercalators

5 July 2018

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Potassium permanganate and tetraethylammonium chloride are a safe and effective substitute for osmium tetroxide in solid-phase fluorescent chemical cleavage of mismatch

5 July 2018

1 reference

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Oxidative thymine dimer repair in the DNA helix

5 July 2018

1 reference

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RNA polymerase II stalled at a thymine dimer: footprint and effect on excision repair

5 July 2018

1 reference

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Influence of cisplatin intrastrand crosslinking on the conformation, thermal stability, and energetics of a 20-mer DNA duplex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

DNA lesions. A thermodynamic perspective

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

Effect of thymine dimer introduction in a 21 base pair oligonucleotide

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

57 Sequencing end-labeled DNA with base-specific chemical cleavages

5 July 2018

1 reference

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5 July 2018

Thymine dimers bend DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

Frequency and spectrum of mutations produced by a single cis-syn thymine-thymine cyclobutane dimer in a single-stranded vector

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

1H NMR study of the exchangeable protons of the duplex d(GCGTTGCG).d(CGCAACGC) containing a thymine photodimer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

Diethylpyrocarbonate and permanganate provide evidence for an unusual DNA conformation induced by binding of the antitumour antibiotics bleomycin and phleomycin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

1H NMR assignment and melting temperature study of cis-syn and trans-syn thymine dimer containing duplexes of d(CGTATTATGC).d(GCATAATACG).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

SOS-dependent replication past a single trans-syn T-T cyclobutane dimer gives a different mutation spectrum and increased error rate compared with replication past this lesion in uninduced cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

Detection of an unusual distortion in A-tract DNA using KMnO4: effect of temperature and distamycin on the altered conformation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

Calorimetry: a tool for DNA and ligand-DNA studies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

Chemical interrogation of mismatches in DNA-DNA and DNA-RNA duplexes under nonstringent conditions by selective 2'-amine acylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

The ability of a variety of polymerases to synthesize past site-specific cis-syn, trans-syn-II, (6-4), and Dewar photoproducts of thymidylyl-(3'-->5')-thymidine

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

Influence of the oxidatively damaged adduct 8-oxodeoxyguanosine on the conformation, energetics, and thermodynamic stability of a DNA duplex.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2891882

TTA.TAA triplet repeats in plasmids form a non-H bonded structure

29 October 2018

1 reference

12 December 2020

DNA sequencing: chemical methods

1 reference

12 December 2020

Influence of DNA sequence on the formation of non-B right-handed helices in oligopurine.oligopyrimidine inserts in plasmids

1 reference

12 December 2020

Chemical reactivity of potassium permanganate and diethyl pyrocarbonate with B DNA: specific reactivity with short A-tracts

1 reference

12 December 2020

gamma-Ray footprinting and fluorescence polarization anisotropy of a 30-mer synthetic DNA fragment with one 2'-deoxy-7-hydro-8- oxoguanosine lesion

1 reference

12 December 2020

Identifiers

DOI

10.1021/BI801417U

1 reference

30 July 2017

1 reference

30 July 2017

1 reference