(Q33942498)

30 July 2017

PlantPhos: using maximal dependence decomposition to identify plant phosphorylation sites with substrate site specificity (English)

1 reference

30 July 2017

1 reference

Tzong-Yi Lee

1

1 reference

PubMed ID

21703007

30 July 2017

Neil Arvin Bretaña

series ordinal

2

1 reference

PubMed ID

21703007

30 July 2017

Cheng-Tsung Lu

series ordinal

3

1 reference

30 July 2017

26 June 2011

1 reference

30 July 2017

1 reference

30 July 2017

12

1 reference

30 July 2017

261

1 reference

Creative Commons Attribution 2.0 Generic

30 July 2017

start time

26 June 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-12-261

0 references

cites work

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1 reference

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The UniProtKB/Swiss-Prot knowledgebase and its plant proteome annotation program

5 July 2018

1 reference

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P3DB: a plant protein phosphorylation database

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites

5 July 2018

1 reference

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5 July 2018

1 reference

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KinasePhos 2.0: a web server for identifying protein kinase-specific phosphorylation sites based on sequences and coupling patterns

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Exploring the role of protein phosphorylation in plants: from signalling to metabolism

5 July 2018

1 reference

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Two Sample Logo: a graphical representation of the differences between two sets of sequence alignments

5 July 2018

1 reference

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PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory

5 July 2018

1 reference

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dbPTM: an information repository of protein post-translational modification

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

KinasePhos: a web tool for identifying protein kinase-specific phosphorylation sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

GPS: a comprehensive www server for phosphorylation sites prediction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation

5 July 2018

1 reference

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WebLogo: A Sequence Logo Generator

5 July 2018

1 reference

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The importance of intrinsic disorder for protein phosphorylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs

5 July 2018

1 reference

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Mass spectrometry-based proteomics

5 July 2018

1 reference

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Automated modelling of signal transduction networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Tyrosine phosphorylation in plant cell signaling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Sequence and structure-based prediction of eukaryotic protein phosphorylation sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Profile hidden Markov models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Prediction of complete gene structures in human genomic DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

On target with a new mechanism for the regulation of protein phosphorylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Regulation of oxidative phosphorylation in plant mitochondria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Plant protein kinase families and signal transduction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Sequence logos: a new way to display consensus sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

GPS: a novel group-based phosphorylation predicting and scoring method.

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-12-261

Exploiting maximal dependence decomposition to identify conserved motifs from a group of aligned signal sequences

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-12-261

Incorporating structural characteristics for identification of protein methylation sites

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-12-261

PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Phospho.ELM: a database of phosphorylation sites--update 2008.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Phosphorylation analysis by mass spectrometry: myths, facts, and the consequences for qualitative and quantitative measurements

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3228547

Incorporating hidden Markov models for identifying protein kinase-specific phosphorylation sites

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21703007

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-12-261

1 reference

30 July 2017

journals/bmcbi/LeeBL11

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

30 July 2017

1 reference

PubMed ID

21703007