(Q33947222)

30 July 2017

title

Systematic bias in genomic classification due to contaminating non-neoplastic tissue in breast tumor samples (English)

1 reference

30 July 2017

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1 reference

Fathi Elloumi

1

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30 July 2017

Zhiyuan Hu

2

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30 July 2017

Yan Li

3

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30 July 2017

Joel S Parker

4

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30 July 2017

Margaret L Gulley

5

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30 July 2017

Keith D Amos

6

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30 July 2017

Melissa A Troester

7

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30 July 2017

publication date

30 June 2011

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30 July 2017

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30 July 2017

volume

4

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30 July 2017

page(s)

54

1 reference

https://scigraph.springernature.com/pub.10.1186/1755-8794-4-54

30 July 2017

exact match

0 references

cites work

Interactions with fibroblasts are distinct in Basal-like and luminal breast cancers.

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Recommendations for validating estrogen and progesterone receptor immunohistochemistry assays

5 July 2018

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Breast cancer molecular profiling with single sample predictors: a retrospective analysis

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

First-generation genomic tests for breast cancer treatment

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Activation of host wound responses in breast cancer microenvironment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

An integrative genomic and transcriptomic analysis reveals molecular pathways and networks regulated by copy number aberrations in basal-like, HER2 and luminal cancers

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Proliferative genes dominate malignancy-risk gene signature in histologically-normal breast tissue

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Supervised risk predictor of breast cancer based on intrinsic subtypes

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Pivotal evaluation of the accuracy of a biomarker used for classification or prediction: standards for study design

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Analysis of the MammaPrint breast cancer assay in a predominantly postmenopausal cohort

5 July 2018

1 reference

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Electronically subtracting expression patterns from a mixed cell population

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

A gene-expression signature to predict survival in breast cancer across independent data sets.

5 July 2018

1 reference

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Robust computational reconstitution - a new method for the comparative analysis of gene expression in tissues and isolated cell fractions

5 July 2018

1 reference

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Computational expression deconvolution in a complex mammalian organ

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

The effect of the stromal component of breast tumours on prediction of clinical outcome using gene expression microarray analysis

5 July 2018

1 reference

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Gene expression and benefit of chemotherapy in women with node-negative, estrogen receptor-positive breast cancer

5 July 2018

1 reference

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In silico microdissection of microarray data from heterogeneous cell populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Gene expression profiling of breast cancer: a new tumor marker

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Mixture models for assessing differential expression in complex tissues using microarray data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Laser capture microdissection and advanced molecular analysis of human breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Expression deconvolution: a reinterpretation of DNA microarray data reveals dynamic changes in cell populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

A gene-expression signature as a predictor of survival in breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

A research-based tumor tissue bank of gynecologic oncology: characteristics of nucleic acids extracted from normal and tumor tissues from different sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Gene expression profiling predicts clinical outcome of breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Separation of samples into their constituents using gene expression data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Molecular portraits of human breast tumours

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3151208

Computational dissection of tissue contamination for identification of colon cancer-specific expression profiles

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1755-8794-4-54

Documenting biospecimen conditions in reports of studies

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21718502

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1755-8794-4-54

1 reference

Dimensions Publication ID

30 July 2017

0 references

1 reference

30 July 2017

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