(Q33956538)

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SUPFAM--a database of potential protein superfamily relationships derived by comparing sequence-based and structure-based families: implications for structural genomics and function annotation in genomes

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Europe PubMed Central

PubMed publication ID

30 July 2017

SUPFAM--a database of potential protein superfamily relationships derived by comparing sequence-based and structure-based families: implications for structural genomics and function annotation in genomes (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

1 reference

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author name string

Shashi B Pandit

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Dilip Gosar

2

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

S Abhiman

3

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

S Sujatha

4

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Sayali S Dixit

5

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Natasha S Mhatre

6

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

R Sowdhamini

7

1 reference

Europe PubMed Central

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30 July 2017

N Srinivasan

8

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Europe PubMed Central

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30 July 2017

language of work or name

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publication date

1 January 2002

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Europe PubMed Central

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30 July 2017

Nucleic Acids Research

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Europe PubMed Central

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30 July 2017

30

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Europe PubMed Central

PubMed publication ID

30 July 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

289-293

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Protein structure modeling for structural genomics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

28 July 2018

IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

28 July 2018

Expectations from structural genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

28 July 2018

The Pfam protein families database.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

28 July 2018

GenTHREADER: an efficient and reliable protein fold recognition method for genomic sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

28 July 2018

The PRESAGE database for structural genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

28 July 2018

Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence

1 reference

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28 July 2018

Pfam: multiple sequence alignments and HMM-profiles of protein domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

28 July 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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28 July 2018

Mapping the protein universe

1 reference

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28 July 2018

SCOP: a structural classification of proteins database for the investigation of sequences and structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

28 July 2018

HOMSTRAD: adding sequence information to structure-based alignments of homologous protein families.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

29 October 2018

Completeness in structural genomics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

29 October 2018

PALI-a database of Phylogeny and ALIgnment of homologous protein structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

29 October 2018

From structure to function: approaches and limitations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

29 October 2018

The CATH Dictionary of Homologous Superfamilies (DHS): a consensus approach for identifying distant structural homologues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

29 October 2018

Identification of related proteins on family, superfamily and fold level.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

29 October 2018

A comparison of sequence and structure protein domain families as a basis for structural genomics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=99061

29 October 2018

Use of a database of structural alignments and phylogenetic trees in investigating the relationship between sequence and structural variability among homologous proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/11752317

12 December 2020

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Identifiers

10.1093/NAR/30.1.289

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

DBLP publication ID

journals/nar/PanditGASDMSS03

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

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